Gene omics information

Query gene ID At3g02140
Gene name TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2726.2At3g02140821182TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)Encodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation.S.X.H.G.
0.2014.4At3g05320819696unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.2014.4At5g41080834110glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAVS.X.H.G.
0.157.8At2g44500819057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.146.8At4g24160828516hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOMFPAS.X.H.G.
0.146.8At5g64660836587U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;POMBFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
301.8100.0GSM311294Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
193.6100.0GSM311293Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
109.699.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
96.899.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
74.899.9GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
68.999.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
65.299.8GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
63.699.8E-MEXP-807-raw-cel-1173273196
57.599.8GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
57.399.8E-MEXP-98-raw-cel-320189024
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-138At5g50350835102unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:chloroplast;MOBFPVAC.G.S.X.
0.011e-138At4g25650828670ACD1-LIKE (ACD1-LIKE)Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.C.G.S.X.
0.031e-138At1g20470838635auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POC.G.S.X.
0.021e-138At1g62760842574invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:unknown;C:unknown;MOFBPVAC.G.S.X.
0.025e-136At4g29880829110protein bindingF:protein binding;P:unknown;C:unknown;MPBOFVAC.G.S.X.
0.035e-136At3g482095008076-Encodes a Plant thionin family proteinC.G.S.X.
0.015e-136At3g21100821662RNA binding / nucleic acid binding / nucleotide bindingF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PMOFBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-344Glycine maxGma.7298.1.S1_s_atBG156412--1e-7At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.049e-134Hordeum vulgareHS07D13u_x_atHS07D13u--1e+0At3g02140TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)C.G.S.X.
0.024e+034Oryza sativaOs08g02710009636.m01706--1e-2At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.34822.1.S1_atCV230476hypothetical protein-2e+0At5g54470zinc finger (B-box type) family proteinC.G.S.X.
0.022e+034Triticum aestivumTaAffx.83745.2.S1_atCA652399--4e-3At4g29240leucine-rich repeat family protein / extensin family proteinC.G.S.X.
0.022e+032Vitis vinifera1619645_atCF202342.1--2e-1At2g35850unknown proteinC.G.S.X.
0.038e-134Zea maysZm.4795.1.A1_atBM074194--8e-2At3g63230unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010581An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.
XGO:0009788Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by abscisic acid.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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