Gene omics information

Query gene ID At3g01830
Gene name calmodulin-related protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At3g01830820033calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBS.X.H.G.
0.8190.4At1g56060842057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.8089.8At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOS.X.H.G.
0.7788.0At1g22810838887AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.S.X.H.G.
0.7687.4At3g57460824913catalytic/ metal ion binding / metalloendopeptidase/ zinc ion bindingF:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPOS.X.H.G.
0.7687.4At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7586.9At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.7586.9At5g66620836794DAR6 (DA1-RELATED PROTEIN 6)F:zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.7486.1At2g14290815916F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
0.7385.5At5g66640836796DAR3 (DA1-RELATED PROTEIN 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
243.2100.0E-MEXP-807-raw-cel-1173273144
219.0100.0E-MEXP-807-raw-cel-1173273252
212.9100.0E-MEXP-807-raw-cel-1173273088
199.8100.0E-MEXP-807-raw-cel-1173273060
189.8100.0E-MEXP-807-raw-cel-1173273170
172.7100.0E-MEXP-807-raw-cel-1173273116
170.4100.0E-MEXP-807-raw-cel-1173273196
164.399.9E-MEXP-807-raw-cel-1173273223
109.699.9E-MEXP-807-raw-cel-1173272948
77.499.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-136At1g51950841623IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)F:transcription factor activity;P:response to auxin stimulus;C:nucleus;PC.G.S.X.
0.028e-134At5g10910830958mraW methylase family proteinF:methyltransferase activity;P:unknown;C:unknown;BOMPC.G.S.X.
0.028e-134At3g13620820565amino acid permease family proteinF:cationic amino acid transmembrane transporter activity;P:transport, amino acid transport;C:membrane;BMOPFAC.G.S.X.
0.028e-134At2g31500817708CPK24member of Calcium Dependent Protein KinaseC.G.S.X.
0.028e-134At2g24560816992carboxylesterase/ hydrolase, acting on ester bondsF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.018e-134At1g33610840255protein bindingF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAVC.G.S.X.
0.028e-134At1g03280838581transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family proteinF:RNA polymerase II transcription factor activity, transcription initiation factor activity;P:transcription initiation from RNA polymerase II promoter;C:endomembrane system, transcription factor TFIIE complex;MFOPVBAC.G.S.X.
0.013e+032At5g60040836126NRPC1Encodes a subunit of RNA polymerase III (aka RNA polymerase C).C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Glycine maxHgAffx.9886.1.S1_atCB378615--3e-1At3g01830calmodulin-related protein, putativeC.G.S.X.
0.054e-134Hordeum vulgareContig22190_s_atContig22190--4e-2At4g27745-C.G.S.X.
0.042e+034Oryza sativaOs09g0563800AK068364.1-Hypothetical protein4e+0At3g01830calmodulin-related protein, putativeC.G.S.X.
0.168e-548Populus trichocarpaPtpAffx.3239.1.A1_atDN489061hypothetical protein-1e-4At3g01830calmodulin-related protein, putativeC.G.S.X.
0.066e-238Triticum aestivumTa.3453.1.S1_atBJ211887--2e+0At3g01830calmodulin-related protein, putativeC.G.S.X.
0.031e+032Vitis vinifera1609940_atCF514063--2e-2At4g31690transcriptional factor B3 family proteinC.G.S.X.
0.036e+030Zea maysZm.4089.1.S1_atAY108577.1--8e-2At5g26340MSS1C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage