CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g01620

Gene name glycosyl transferase family 17 protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g01620 821102 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFV S.X. H.G.
0.52 67.4 At3g20200 821564 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.50 65.3 At3g29060 822550 - F:unknown;P:unknown;C:integral to membrane;MFPOVBA S.X. H.G.
0.50 65.3 At3g59830 825152 ankyrin protein kinase, putative F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:chloroplast;MOPBFVA S.X. H.G.
0.42 53.9 At5g09430 830802 hydrolase F:hydrolase activity;P:unknown;C:unknown;BOMPAF S.X. H.G.
0.36 43.6 At5g26150 832684 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.33 38.1 At3g01630 819891 - F:unknown;P:unknown;C:unknown;PBOFAM S.X. H.G.
0.29 30.3 At3g06830 819867 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOAM S.X. H.G.
0.19 12.7 At2g18180 816331 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative F:transporter activity;P:transport;C:unknown;MPFO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
425.5 100.0 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
407.9 100.0 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
253.1 100.0 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
212.9 100.0 GSM154504 Arabidopsis desiccated mature pollen grains rep2 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
201.3 100.0 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
200.1 100.0 GSM239252 Columbia glabrous (C24) wild type stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
196.8 100.0 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
171.6 100.0 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
115.5 99.9 GSM142736 DH001_ATH1_A3-TCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
104.2 99.9 GSM239254 CaMV::DME stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.70 2e-114 412 At5g14480 831299 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFV C.G. S.X.
0.28 7e-22 105 At3g27540 822376 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFV C.G. S.X.
0.13 1e-8 61 At1g67880 843116 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMFBV C.G. S.X.
0.21 1e-8 61 At1g12990 837857 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFV C.G. S.X.
0.05 2e-6 54 At2g13290 815815 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation, peptidoglycan biosynthetic process;C:endomembrane system, membrane;OPMBFV C.G. S.X.
0.07 2e-4 48 At3g26445 822249 glycosyl transferase family 17 protein F:beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:endomembrane system, membrane;PF C.G. S.X.
0.01 1e-1 38 At5g42140 834219 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein F:chromatin binding, phosphoinositide binding, zinc ion binding, Ran GTPase binding;P:signal transduction;C:unknown;MOPBFAV C.G. S.X.
0.00 1e-1 38 At3g50380 824202 - F:unknown;P:protein localization;C:mitochondrion;MFPO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-3 44 Glycine max GmaAffx.85975.1.S1_at BF424326 - - 9e-14 At3g27540 glycosyl transferase family 17 protein C.G. S.X.
0.09 2e-11 69 Hordeum vulgare Contig4678_at Contig4678 - - 7e-11 At3g01620 glycosyl transferase family 17 protein C.G. S.X.
0.07 5e-9 63 Oryza sativa Os.17598.1.S1_at - - - 0 C.G. S.X.
0.09 2e-7 57 Populus trichocarpa PtpAffx.19746.1.S1_at CN519805 - - 3e-5 At5g14480 glycosyl transferase family 17 protein C.G. S.X.
0.09 4e-11 69 Triticum aestivum Ta.22485.1.S1_at CD452804 - - 7e-11 At3g01620 glycosyl transferase family 17 protein C.G. S.X.
0.06 3e-3 42 Vitis vinifera 1616587_at CF204150.1 - - 3e-14 At5g14480 glycosyl transferase family 17 protein C.G. S.X.
0.02 3e-1 36 Zea mays Zm.4685.1.A1_at AI737985 - - 3e+0 At4g37780 MYB87 (MYB DOMAIN PROTEIN 87) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006487 The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00359 Glucosyltransferase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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