Gene omics information

Query gene ID At3g01040
Gene name GAUT13 (Galacturonosyltransferase 13)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.092.8At3g01040821312GAUT13 (Galacturonosyltransferase 13)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
0.3846.7At4g01960828190unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2930.3At4g35790829733ATPLDDELTAEncodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.S.X.H.G.
0.2319.3At1g28960839773ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)F:hydrolase activity, CoA pyrophosphatase activity (sent to SF);P:biological_process unknown;C:mitochondrion;BOMFPAS.X.H.G.
0.168.8At5g06560830544unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.699.8GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
47.199.8GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
38.099.8GSM154504Arabidopsis desiccated mature pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
37.799.7E-MEXP-1138-raw-cel-1432773354
34.699.7E-MEXP-1138-raw-cel-1432773258
29.799.7E-MEXP-1138-raw-cel-1432772778
28.899.7GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
25.499.6E-MEXP-1138-raw-cel-1432773290
22.399.6E-MEXP-1138-raw-cel-1432773002
22.299.6E-MEXP-1138-raw-cel-1432772810
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8801610At5g15470831400GAUT14 (Galacturonosyltransferase 14)Encodes a protein with putative galacturonosyltransferase activity.C.G.S.X.
0.098e-446At5g54690835558GAUT12 (GALACTURONOSYLTRANSFERASE 12)Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).C.G.S.X.
0.043e-344At3g25140822105QUA1 (QUASIMODO 1)Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.C.G.S.X.
0.018e-136At5g55830835677lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.038e-136At3g02350820474GAUT9 (Galacturonosyltransferase 9)Encodes a protein with putative galacturonosyltransferase activity.C.G.S.X.
0.018e-136At3g13330820533bindingF:binding;P:unknown;C:cellular_component unknown;FMOPC.G.S.X.
0.013e+034At4g20460827794NAD-dependent epimerase/dehydratase family proteinF:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process;C:endomembrane system;BOPMAFVC.G.S.X.
0.013e+034At3g45640823706ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3)Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.152e-20101Glycine maxGmaAffx.83381.1.S1_atBM091708--7e-6At5g15470GAUT14 (Galacturonosyltransferase 14)C.G.S.X.
0.044e-446Hordeum vulgareContig13208_atContig13208--9e-9At5g15470GAUT14 (Galacturonosyltransferase 14)C.G.S.X.
0.203e-20101Oryza sativaOs03g02118009631.m01048-Glycosyl transferase, family 8 protein9e-20At5g15470GAUT14 (Galacturonosyltransferase 14)C.G.S.X.
0.482e-88327Populus trichocarpaPtpAffx.102976.1.S1_atAI164544glycosyltransferase, CAZy family GT8-9e-89At3g01040GAUT13 (Galacturonosyltransferase 13)C.G.S.X.
0.049e-446Triticum aestivumTa.7145.1.S1_atCK194366--2e-8At5g47780GAUT4 (Galacturonosyltransferase 4)C.G.S.X.
0.062e-859Vitis vinifera1619631_atCF610109hypothetical protein LOC100242366-4e-19At5g15470GAUT14 (Galacturonosyltransferase 14)C.G.S.X.
0.034e-446Zea maysZm.7150.2.A1_a_atCK370688hypothetical protein LOC100279278-9e-8At5g15470GAUT14 (Galacturonosyltransferase 14)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0016051The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase
00437Link to KaPPA-View 4Xyloglucan biosynthesis and modification



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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