Gene omics information

Query gene ID At2g48150
Gene name ATGPX4 (GLUTATHIONE PEROXIDASE 4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g48150819427ATGPX4 (GLUTATHIONE PEROXIDASE 4)Encodes glutathione peroxidase.S.X.H.G.
0.8089.8At4g00350827306MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.7888.6At3g46520823805ACT12 (ACTIN-12)Member of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development.S.X.H.G.
0.7486.1At1g24620839076polcalcin, putative / calcium-binding pollen allergen, putativeF:calcium ion binding;P:response to cold;C:nucleus;MFPOBVS.X.H.G.
0.7385.5At1g67290843049glyoxal oxidase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOMS.X.H.G.
0.5673.0At5g07420830633pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMS.X.H.G.
0.4659.8At3g42880823335leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.3948.4At3g61230825295LIM domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.2726.2At1g75160843853unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
312.4100.0E-MEXP-1138-raw-cel-1432773290
240.3100.0E-MEXP-1138-raw-cel-1432773322
236.6100.0E-MEXP-1138-raw-cel-1432773258
230.2100.0GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
219.8100.0GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
168.2100.0E-MEXP-1138-raw-cel-1432773066
167.6100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
149.199.9E-MEXP-1138-raw-cel-1432773226
148.799.9GSM154504Arabidopsis desiccated mature pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
146.599.9E-MEXP-1138-raw-cel-1432773354
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.693e-44178At3g63080825483ATGPX5 (glutathione peroxidase 5)Encodes glutathione peroxidase.C.G.S.X.
0.062e-550At4g11600826765ATGPX6 (GLUTATHIONE PEROXIDASE 6)Encodes glutathione peroxidase.C.G.S.X.
0.033e-446At2g45330819141emb1067 (embryo defective 1067)F:tRNA 2'-phosphotransferase activity, transferase activity, transferring phosphorus-containing groups;P:embryonic development ending in seed dormancy, tRNA splicing, via endonucleolytic cleavage and ligation;C:unknown;BFOMAPVC.G.S.X.
0.041e-344At5g23600832426tRNA 2'phosphotransferase, putativeF:tRNA 2'-phosphotransferase activity, transferase activity, transferring phosphorus-containing groups;P:tRNA splicing, via endonucleolytic cleavage and ligation;C:unknown;BFOMAPVC.G.S.X.
0.054e-342At2g43350818936ATGPX3 (GLUTATHIONE PEROXIDASE 3)Glutathione peroxidase. Functions as both a redox transducer and a scavenger in abscisic acid and drought stress responses. Interacts with ABI2 and ABI1.C.G.S.X.
0.042e-240At1g63460842652glutathione peroxidase, putativeF:glutathione peroxidase activity;P:response to oxidative stress;C:cellular_component unknown;OBMPFVC.G.S.X.
0.116e-238At2g31570817715ATGPX2 (GLUTATHIONE PEROXIDASE 2)glutathione peroxidase GPxC.G.S.X.
0.011e+034At5g37650833743unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.156e-342Glycine maxGmaAffx.89649.1.S1_s_atCK606251--1e-11At2g31570ATGPX2 (GLUTATHIONE PEROXIDASE 2)C.G.S.X.
0.214e-1477Hordeum vulgareContig4245_s_atContig4245--1e-13At2g48150ATGPX4 (GLUTATHIONE PEROXIDASE 4)C.G.S.X.
0.133e-550Oryza sativaOs02g0664000AK058456.1-GPX12Hv, glutathione peroxidase-like protein7e-34At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)C.G.S.X.
0.096e-652Populus trichocarpaPtp.5821.1.S1_atCV240646glutathione peroxidase-6e-28At2g43350ATGPX3 (GLUTATHIONE PEROXIDASE 3)C.G.S.X.
0.223e-1375Triticum aestivumTa.2696.1.S1_a_atCK163843--5e-13At2g48150ATGPX4 (GLUTATHIONE PEROXIDASE 4)C.G.S.X.
0.091e-342Vitis vinifera1608089_atBQ796412hypothetical protein LOC100242497-8e-9At3g63080ATGPX5 (glutathione peroxidase 5)C.G.S.X.
0.163e-548Zea maysZm.5695.1.A1_atAY104663.1glutathione peroxidase 4-9e-9At3g63080ATGPX5 (glutathione peroxidase 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00480Link to KEGG PATHWAYGlutathione metabolism
00590Link to KEGG PATHWAYArachidonic acid metabolism
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