Gene omics information

Query gene ID At2g48130
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6378.1At2g48130819425protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PBOMS.X.H.G.
0.9396.4At4g36610829813hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOMPFAS.X.H.G.
0.8894.0At5g13580831202ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPVS.X.H.G.
0.8391.4At5g41040834106transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBOS.X.H.G.
0.8089.8At2g48140819426EDA4 (embryo sac development arrest 4)F:lipid binding;P:megagametogenesis, lipid transport;C:anchored to membrane;PBMOFVS.X.H.G.
0.7385.5At1g68850843218peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.7184.2At5g09520830811hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVAS.X.H.G.
0.7184.2At5g09530830812hydroxyproline-rich glycoprotein family proteinF:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
133.099.9GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
96.899.9E-MEXP-828-raw-cel-1156922659
85.899.9GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
85.699.9GSM75508Col-0 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
84.999.9GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
81.999.9GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
74.599.9E-MEXP-722-raw-cel-1062242948
71.099.9GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
65.399.8GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
57.999.8E-MEXP-722-raw-cel-1062243183
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e+034At4g04450825775WRKY42member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.014e+032At5g17420831608IRX3 (IRREGULAR XYLEM 3)Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).C.G.S.X.
0.014e+032At4g15810827262GTP bindingF:GTP binding;P:biological_process unknown;C:chloroplast outer membrane;BMOPFAC.G.S.X.
0.024e+032At3g54260824593unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PMC.G.S.X.
0.024e+032At3g21175821670ZML1 (ZIM-LIKE 1)member of a novel family of plant-specific GATA-type transcription factors.C.G.S.X.
0.014e+032At3g19430821477late embryogenesis abundant protein-related / LEA protein-relatedF:structural constituent of cell wall;P:unknown;C:unknown;MBOFPVAC.G.S.X.
0.024e+032At2g47890819401zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Glycine maxHgAffx.3512.1.A1_atCK349178--8e-1At3g23637DVL21 (DEVIL 21)C.G.S.X.
0.042e+032Hordeum vulgareHB23F22r_atHB23F22r--3e+0At3g58010unknown proteinC.G.S.X.
0.048e+032Oryza sativaOsAffx.4864.1.S1_at---0C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.209737.1.S1_x_atpmrna19215hypothetical protein-3e-6At3g23250MYB15 (MYB DOMAIN PROTEIN 15)C.G.S.X.
0.041e+034Triticum aestivumTaAffx.56753.1.S1_atCA645099--2e+0At3g07425unknown proteinC.G.S.X.
0.035e+030Vitis vinifera1622650_atCD714725--1e-71At1g15290bindingC.G.S.X.
0.032e+032Zea maysZm.18094.1.A1_atCF636218--2e+0At4g29930basic helix-loop-helix (bHLH) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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