Gene omics information

Query gene ID At2g47930
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At2g47930819405AGP26 (ARABINOGALACTAN PROTEIN 26)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OPMVBFAS.X.H.G.
0.7184.2At4g00400828140GPAT8 (glycerol-3-phosphate acyltransferase 8)Involved in cutin assembly. Is functional redundant of GPAT4.S.X.H.G.
0.5469.5At4g23820828482glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAS.X.H.G.
0.4862.5At3g61550825328zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.4862.5At3g20820821630leucine-rich repeat family proteinF:protein binding;P:signal transduction, defense response;C:apoplast, cell wall, chloroplast, membrane;PMOBFAS.X.H.G.
0.4050.8At2g26250817165KCS10 (3-KETOACYL-COA SYNTHASE 10)epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.S.X.H.G.
0.3846.7At3g16370820884GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:apoplast;PBFOMS.X.H.G.
0.3643.6At1g01430837247unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.3338.1At2g45470819155FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8)F:unknown;P:unknown;C:anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall;OBPMVFAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.099.6GSM134516Col-0_4day_dark_+lincomycin_rep2GSE5759red illumination w/o lincomycin
22.399.6GSM134517Col-0_4day_red illumination_-lincomycin_rep1GSE5759red illumination w/o lincomycin
22.099.6GSM134515Col-0_4day_dark_+lincomycin_rep1GSE5759red illumination w/o lincomycin
19.399.6GSM134519Col-0_4day_red illumination_+lincomycin_rep1GSE5759red illumination w/o lincomycin
19.099.5GSM25316424h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
17.899.5GSM134513Col-0_4day_dark_-lincomycin_rep1GSE5759red illumination w/o lincomycin
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.035e-238At3g14750820703unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFAVC.G.S.X.
0.032e-136At1g26300839171BSD domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFAC.G.S.X.
0.038e-134At5g36700833635PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1)F:phosphoglycolate phosphatase activity;P:metabolic process;C:chloroplast stroma, chloroplast;BOMFAPC.G.S.X.
0.038e-134At5g36790833646phosphoglycolate phosphatase, putativeF:hydrolase activity, phosphatase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:apoplast, nucleus, chloroplast stroma, vacuole, cytoplasm;BOMFAPC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Glycine maxGmaAffx.75045.1.A1_atCD397699--7e-1At3g22183unknown proteinC.G.S.X.
0.056e+030Hordeum vulgareContig19331_atContig19331--3e+0At1g67210proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.056e+032Oryza sativaOsAffx.20915.1.S1_at---0C.G.S.X.
0.031e+034Populus trichocarpaPtpAffx.110428.1.S1_atCA825924--1e+0At4g13870WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE)C.G.S.X.
0.045e-238Triticum aestivumTaAffx.132354.1.S1_atCA616304--9e-1At4g28290unknown proteinC.G.S.X.
0.049e-132Vitis vinifera1616158_atCD801717hypothetical protein LOC100242302-4e+0At4g28110AtMYB41 (myb domain protein 41)C.G.S.X.
0.045e+030Zea maysZmAffx.496.1.A1_atAI691675--8e-1At5g48580FKBP15-2C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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