Gene omics information

Query gene ID At2g47770
Gene name benzodiazepine receptor-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At2g47770819389benzodiazepine receptor-relatedF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BMOPAFS.X.H.G.
0.7586.9At5g50360835103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.7385.5At5g52300835306LTI65 (LOW-TEMPERATURE-INDUCED 65)encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.S.X.H.G.
0.4355.3At1g52690841701late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PBMOFVAS.X.H.G.
0.2726.2At4g02280828081SUS3 (sucrose synthase 3)Encodes a protein with sucrose synthase activity (SUS3).S.X.H.G.
0.2014.4At3g17520821017late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MOBFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
194.0100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
193.3100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
193.0100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
176.7100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
172.4100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
153.799.9GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
144.699.9GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
137.999.9GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
136.399.9GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
102.899.9GSM131299AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.013e-136At1g63640842668kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:plasma membrane;MOFPBAVC.G.S.X.
0.031e+034At5g03080831801phosphatidic acid phosphatase-related / PAP2-relatedF:catalytic activity;P:biological_process unknown;C:membrane;BMFOPAC.G.S.X.
0.031e+034At5g46970834743invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.021e+034At4g25230828626RIN2 (RPM1 INTERACTING PROTEIN 2)RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1.C.G.S.X.
0.021e+034At1g58120842179unknown proteinF:unknown;P:unknown;C:unknown;PC.G.S.X.
0.031e+034At1g59590842249ZCF37ZCF37 mRNA, complete cdsC.G.S.X.
0.011e+034At1g59610842251ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxGmaAffx.6019.1.A1_atBG157236--7e-24At4g18120AML3 (ARABIDOPSIS MEI2-LIKE 3)C.G.S.X.
0.029e+030Hordeum vulgareContig18449_atContig18449--2e+0At5g37640UBQ9C.G.S.X.
0.032e+034Oryza sativaOs05g0227600AY224438.1-Conserved hypothetical protein3e-6At2g24060translation initiation factor 3 (IF-3) family proteinC.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.108242.1.A1_atCV248428--6e+0At2g3760060S ribosomal protein L36 (RPL36A)C.G.S.X.
0.035e+032Triticum aestivumTaAffx.108056.1.S1_atCA692016--4e+0At4g3920040S ribosomal protein S25 (RPS25E)C.G.S.X.
0.035e+030Vitis vinifera1619292_atCF404263--2e-1At1g58460unknown proteinC.G.S.X.
0.032e+032Zea maysZmAffx.1289.1.S1_s_at40794996-22--3e+0At3g43880unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006970A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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