CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g47160

Gene name BOR1 (REQUIRES HIGH BORON 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g47160 819329 BOR1 (REQUIRES HIGH BORON 1) Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. S.X. H.G.
0.33 38.1 At1g28440 839742 HSL1 (HAESA-Like 1) F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVA S.X. H.G.
0.08 2.3 At5g65670 836693 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9) auxin (indole-3-acetic acid) induced gene S.X. H.G.
0.04 0.9 At1g71010 843440 phosphatidylinositol-4-phosphate 5-kinase family protein F:1-phosphatidylinositol-4-phosphate 5-kinase activity, protein binding, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process, cellular protein metabolic process;C:cellular_component unknown;MOFPAB S.X. H.G.
0.03 0.6 At2g47900 819402 AtTLP3 (TUBBY LIKE PROTEIN 3) Member of TLP family S.X. H.G.
0.03 0.6 At4g33080 829445 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
96.2 99.9 GSM179961 Arabidopsis roots, ethylene treatment, replica 2 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
94.2 99.9 GSM179960 Arabidopsis roots, ethylene treatment, replica 1 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
89.2 99.9 GSM179969 Arabidopsis aux1 mutant roots, ethylene treatment, replica 1 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
75.9 99.9 GSM131660 ATGE_28_C2 GSE5633 AtGenExpress: Developmental series (shoots and stems)
75.3 99.9 GSM133749 Turner_A-3-Turne-Mut-Base1_SLD GSE5729 Role of COV in vascular patterning
70.5 99.9 GSM131659 ATGE_28_B2 GSE5633 AtGenExpress: Developmental series (shoots and stems)
68.9 99.9 GSM133750 Turner_A-4-Turne-Mut-Base2_SLD GSE5729 Role of COV in vascular patterning
68.7 99.9 GSM131658 ATGE_28_A2 GSE5633 AtGenExpress: Developmental series (shoots and stems)
65.1 99.8 GSM179970 Arabidopsis aux1 mutant roots, ethylene treatment, replica 2 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
64.1 99.8 GSM179958 Arabidopsis roots, air treatment, replica 1 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.82 0 1766 At3g62270 825400 anion exchange family protein F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV C.G. S.X.
0.30 2e-23 111 At3g06450 819821 anion exchange family protein F:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBV C.G. S.X.
0.03 1e-6 56 At5g25430 832617 anion exchanger F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV C.G. S.X.
0.01 7e-2 40 At4g39160 830071 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:unknown;C:unknown;OMFBPVA C.G. S.X.
0.02 1e+0 36 At4g35770 829730 SEN1 (SENESCENCE 1) Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 1e-22 109 Glycine max GmaAffx.78135.1.S1_at BM309768 - - 3e-17 At3g62270 anion exchange family protein C.G. S.X.
0.04 9e-6 52 Hordeum vulgare Contig19634_at Contig19634 - - 2e-6 At3g62270 anion exchange family protein C.G. S.X.
0.27 5e-38 161 Oryza sativa Os12g0566000 AK100510.1 - HCO3-transporter domain containing protein 5e-31 At3g62270 anion exchange family protein C.G. S.X.
0.70 2e-113 410 Populus trichocarpa PtpAffx.211693.1.S1_at pmrna22921 anion exchanger family protein - 2e-113 At2g47160 BOR1 (REQUIRES HIGH BORON 1) C.G. S.X.
0.17 2e-20 101 Triticum aestivum Ta.5402.1.S1_at CK152012 - - 7e-21 At3g62270 anion exchange family protein C.G. S.X.
0.02 2e-2 40 Vitis vinifera 1617877_at CF517286 hypothetical protein LOC100266902 - 6e-10 At1g10200 WLIM1 C.G. S.X.
0.36 3e-30 133 Zea mays Zm.13841.1.S1_at AY104076.1 - - 2e-42 At3g62270 anion exchange family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0046713 The directed movement of boron into, out of, within or between cells. Boron is a group 13 element, with properties which are borderline between metals and non-metals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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