CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g46880

Gene name PAP14 (PURPLE ACID PHOSPHATASE 14)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.65 79.6 At2g46880 819301 PAP14 (PURPLE ACID PHOSPHATASE 14) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO S.X. H.G.
1.00 100.0 At5g20790 832202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.92 96.0 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA S.X. H.G.
0.92 96.0 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF S.X. H.G.
0.92 96.0 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. S.X. H.G.
0.92 96.0 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO S.X. H.G.
0.91 95.6 At1g73010 843632 phosphatase F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF S.X. H.G.
0.91 95.6 At3g02040 821175 SRG3 (senescence-related gene 3) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAV S.X. H.G.
0.85 92.4 At1g19200 838503 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.82 90.9 At5g20150 832137 SPX1 (SPX DOMAIN GENE 1) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBA S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
480.0 100.0 GSM270865 Arabidopsis cell culture, 4 h_control_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
474.2 100.0 GSM270853 Arabidopsis cell culture, 4 h_control_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
367.4 100.0 GSM270814 Arabidopsis cell culture, 4 h_control_rep1 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
331.6 100.0 E-ATMX-31-raw-cel-1516947916
288.4 100.0 GSM270866 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
188.4 100.0 E-ATMX-31-raw-cel-1516947899
174.2 100.0 E-MEXP-1797-raw-cel-1669768012
149.6 99.9 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
134.2 99.9 GSM142735 DH001_ATH1_A2-BCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
131.4 99.9 E-MEXP-1797-raw-cel-1669768057
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.09 6e-4 46 At5g63140 836435 ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO C.G. S.X.
0.02 6e-1 36 At4g25310 828634 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFM C.G. S.X.
0.02 6e-1 36 At2g22370 816769 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO C.G. S.X.
0.02 6e-1 36 At2g23810 816913 TET8 (TETRASPANIN8) Member of TETRASPANIN family C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Glycine max PsAffx.psHB024xJ13f_at PsAffx.psHB024xJ13f - - 3e+0 At2g41240 BHLH100 (BASIC HELIX-LOOP-HELIX PROTEIN 100) C.G. S.X.
0.02 5e+0 32 Hordeum vulgare HS07H01u_x_at HS07H01u - - 5e+0 At5g43210 endo/excinuclease amino terminal domain-containing protein C.G. S.X.
0.02 1e+0 36 Oryza sativa OsAffx.26607.3.S1_at - - - 0 C.G. S.X.
0.04 9e-7 56 Populus trichocarpa PtpAffx.3736.1.S1_at CV250453 hypothetical protein - 2e-4 At5g63140 ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29) C.G. S.X.
0.02 1e+1 32 Triticum aestivum TaAffx.93338.1.S1_at BJ222356 - - 3e-16 At4g32700 - C.G. S.X.
0.03 7e-1 34 Vitis vinifera 1617349_at CF203026.1 hypothetical protein LOC100264419 - 4e-1 Atmg01020 - C.G. S.X.
0.02 1e+0 34 Zea mays Zm.9200.1.A1_at BM336786 - - 4e+0 At3g45600 TET3 (TETRASPANIN3) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage