CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g46750

Gene name FAD-binding domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.32 35.7 At2g46750 819288 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOPFMA S.X. H.G.
0.86 93.1 At2g18360 816351 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:endomembrane system;BOMPFA S.X. H.G.
0.86 93.1 At2g18370 816352 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. S.X. H.G.
0.86 93.1 At3g58550 825024 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P S.X. H.G.
0.86 93.1 At5g63560 836475 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
130.1 99.9 GSM131305 AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
120.8 99.9 GSM131306 AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
84.3 99.9 GSM265432 Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
63.9 99.8 GSM265472 Arabidopsis, whole roots, -Fe, 48 hour, rep 2 GSE10502 Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
60.4 99.8 GSM131330 AtGen_6-3622_Saltstress-Roots-24.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
59.3 99.8 GSM265471 Arabidopsis, whole roots, -Fe, 48 hour, rep 1 GSE10502 Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
57.4 99.8 GSM131329 AtGen_6-3621_Saltstress-Roots-24.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
54.2 99.8 GSM131410 AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2 GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
52.5 99.8 GSM131438 AtGen_6-8622_Woundingstress-Roots-24.0h_Rep2 GSE5627 AtGenExpress: Stress Treatments (Wounding stress)
51.4 99.8 GSM265473 Arabidopsis, whole roots, -Fe, 72 hour, rep 1 GSE10502 Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.82 0 1729 At2g46760 819289 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA C.G. S.X.
0.84 0 1717 At2g46740 819287 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA C.G. S.X.
0.52 7e-51 202 At1g32300 840122 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system, membrane;BOFPMA C.G. S.X.
0.51 6e-48 192 At5g56490 835750 FAD-binding domain-containing protein F:oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BOFPMA C.G. S.X.
0.25 8e-29 129 At5g56470 835748 FAD-dependent oxidoreductase family protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity;P:biological_process unknown;C:membrane;BPMOF C.G. S.X.
0.01 6e-2 40 At3g46690 823822 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF C.G. S.X.
0.01 9e-1 36 At4g10500 826642 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM C.G. S.X.
0.01 9e-1 36 At4g29120 829033 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:unknown;BOMFPAV C.G. S.X.
0.01 9e-1 36 At2g28350 817382 ARF10 (AUXIN RESPONSE FACTOR 10) Involved in root cap cell differentiation. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-5 52 Glycine max GmaAffx.78456.1.S1_at BQ081108 - - 4e-6 At2g46750 FAD-binding domain-containing protein C.G. S.X.
0.03 2e+0 34 Hordeum vulgare Contig14510_at Contig14510 - - 3e+0 At2g46750 FAD-binding domain-containing protein C.G. S.X.
0.02 1e-1 40 Oryza sativa Os08g0114300 AK105866.1 - Plant-specific FAD-dependent oxidoreductase familyprotein 7e-2 At2g46750 FAD-binding domain-containing protein C.G. S.X.
0.09 2e-5 52 Populus trichocarpa PtpAffx.202299.1.S1_at pmrna4600 hypothetical protein - 1e-5 At2g46750 FAD-binding domain-containing protein C.G. S.X.
0.02 1e+1 32 Triticum aestivum TaAffx.86096.1.S1_at CA616777 - - 2e+1 At4g23090 unknown protein C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1619429_at CF513017 - - 1e+0 At1g15430 - C.G. S.X.
0.01 2e+0 34 Zea mays Zm.2660.1.A1_at AW066755 hypothetical protein LOC100194122 - 3e-1 At3g19180 ARC6H C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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