Gene omics information

Query gene ID At2g46660
Gene name CYP78A6
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At2g46660819278CYP78A6member of CYP78AS.X.H.G.
0.157.8At3g60720825243PDLP8 (PLASMODESMATA-LOCATED PROTEIN 8)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.S.X.H.G.
0.135.8At5g55380835631membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedF:acyltransferase activity;P:biological_process unknown;C:cellular_component unknown;BPOFS.X.H.G.
0.092.8At4g13260826956YUC2 (YUCCA2)F:NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity;P:auxin biosynthetic process;C:unknown;BOFMPAS.X.H.G.
0.061.4At1g28220839716ATPUP3Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
220.7100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
63.799.8GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
48.599.8GSM10445WT 24-Hr Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
45.899.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
43.599.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
41.199.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
40.699.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.399.8GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
39.999.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.899.8GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.591e-101371At3g61880825361CYP78A9 (CYTOCHROME P450 78A9)Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.C.G.S.X.
0.182e-26121At1g01190839233CYP78A8member of CYP78AC.G.S.X.
0.021e-552At1g13710837932CYP78A5member of CYP78AC.G.S.X.
0.011e-242At3g20940821644CYP705A30a member of A-type cytochrome P450C.G.S.X.
0.011e-242At3g20950821645CYP705A32member of CYP705AC.G.S.X.
0.011e-242At3g20120821555CYP705A21member of CYP705AC.G.S.X.
0.025e-240At5g64620836583C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2)Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.C.G.S.X.
0.012e-138At1g28020839695pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-1481Glycine maxGma.138.1.S1_atAF022463.1--4e-18At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.031e-138Hordeum vulgareContig15786_atContig15786--1e-4At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.074e-138Oryza sativaOs09g05287009637.m03020-Cytochrome p450 (CYP78A9)6e-7At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.215e-654Populus trichocarpaPtp.5520.1.S1_atCK099052cytochrome P450-2e-19At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.023e-344Triticum aestivumTaAffx.111067.1.S1_x_atCA650713--4e+0At2g42130unknown proteinC.G.S.X.
0.106e-238Vitis vinifera1622687_atCB344274hypothetical protein LOC100258159-2e-6At1g01190CYP78A8C.G.S.X.
0.023e-136Zea maysZm.10065.1.A1_atBM378954--1e+0At2g44530ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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