Gene omics information

Query gene ID At2g46400
Gene name WRKY46
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8391.4At2g46400819248WRKY46member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.6882.2At5g61900836311BON1 (BONZAI 1)Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.S.X.H.G.
0.6579.6At3g44260823551CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:response to biotic stimulus, response to wounding, RNA modification;C:nucleus;MPOFS.X.H.G.
0.6478.9At3g50930824257BCS1 (CYTOCHROME BC1 SYNTHESIS)F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:mitochondrion, plastid;BOMFPAVS.X.H.G.
0.6478.9At1g28370839733ERF11 (ERF DOMAIN PROTEIN 11)encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.S.X.H.G.
0.6378.1At1g63750842679ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein bindingF:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVAS.X.H.G.
0.6378.1At5g47220834768ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.S.X.H.G.
0.6176.7At3g08720820019S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2)Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.S.X.H.G.
0.6075.7At1g35210840410unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POS.X.H.G.
0.6075.7At3g23250821904MYB15 (MYB DOMAIN PROTEIN 15)Member of the R2R3 factor gene family.S.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
75.999.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
65.199.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.087e-342At4g23810828481WRKY53member of WRKY Transcription Factor; Group IIIC.G.S.X.
0.013e-240At3g60920825263beige/BEACH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBC.G.S.X.
0.021e-138At5g11000830967unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
0.011e-138At3g48195823976phox (PX) domain-containing proteinF:protein binding, phosphoinositide binding;P:intracellular signaling cascade, cell communication;C:unknown;MOPBFC.G.S.X.
0.021e-138At2g32860817847BGLU33 (BETA GLUCOSIDASE 33)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAC.G.S.X.
0.024e-136At3g25520822138ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5)Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.C.G.S.X.
0.034e-136At3g12880820471invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-138Glycine maxGmaAffx.7166.1.S1_atBU578286WRKY43 protein-7e-13At5g24110WRKY30C.G.S.X.
0.038e-134Hordeum vulgareHE01I24u_s_atHE01I24u--2e-1At2g28310unknown proteinC.G.S.X.
0.023e+034Oryza sativaOs07g0628100NM_193053.1--2e+1At5g63400ADK1 (ADENYLATE KINASE 1)C.G.S.X.
0.054e-240Populus trichocarpaPtpAffx.212305.1.S1_atpmrna24129hypothetical protein-6e-9At2g40740WRKY55C.G.S.X.
0.032e+034Triticum aestivumTaAffx.113126.1.S1_atCA617102--1e+0At2g46400WRKY46C.G.S.X.
0.025e-134Vitis vinifera1611550_atCD800189hypothetical protein LOC100263619-2e-9At4g11070WRKY41C.G.S.X.
0.037e-134Zea maysZm.17617.1.A1_atCF623344hypothetical protein LOC100276896-8e-2At5g53045-C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage