Gene omics information

Query gene ID At2g45910
Gene name protein kinase family protein / U-box domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At2g45910819199protein kinase family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;MPOBFVAS.X.H.G.
0.4457.2At5g46410834684NLI interacting factor (NIF) family proteinF:phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MOFPBVS.X.H.G.
0.4050.8At3g52240824389unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBS.X.H.G.
0.4050.8At3g55270824693MKP1 (MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1)MAP kinase phosphatase (MKP1)S.X.H.G.
0.1912.7At1g08720837393EDR1 (ENHANCED DISEASE RESISTANCE 1)enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearumS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
56.199.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
40.299.8GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
37.999.8GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.
36.099.7GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
31.399.7GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.799.7GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.299.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
29.499.7GSM142641MC002_ATH1_A7.1-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
29.299.7GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
29.099.7GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.061e-965At3g61390825311U-box domain-containing proteinF:unknown;P:unknown;C:unknown;OMFPBAVC.G.S.X.
0.055e-654At3g49060824068protein kinase family protein / U-box domain-containing proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:plasma membrane;MPOBFVAC.G.S.X.
0.052e-552At2g45920819200U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;POMFBAVC.G.S.X.
0.068e-550At3g61410825313-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.025e-344At1g56040842055binding / protein binding / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, protein binding, binding;P:RNA metabolic process, protein ubiquitination;C:ubiquitin ligase complex;MOBFPAVC.G.S.X.
0.012e-242At5g57610835865protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.012e-242At3g20200821564protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.022e-242At1g01680839251U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;PMOBFVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.168e-963Glycine maxGma.7517.1.S1_atBU548272--2e-9At2g45910protein kinase family protein / U-box domain-containing proteinC.G.S.X.
0.036e-446Hordeum vulgareHO05O09S_atHO05O09S--1e+1At5g61110protein binding / zinc ion bindingC.G.S.X.
0.032e-759Oryza sativaOs02g06655009630.m04316--1e-7At2g45910protein kinase family protein / U-box domain-containing proteinC.G.S.X.
0.162e-1275Populus trichocarpaPtp.3802.1.A1_atCV260698hypothetical protein-4e-13At2g45910protein kinase family protein / U-box domain-containing proteinC.G.S.X.
0.021e-346Triticum aestivumTaAffx.56359.1.S1_atCA653512--7e-2At5g39670calcium-binding EF hand family proteinC.G.S.X.
0.083e-859Vitis vinifera1621263_atCA818600hypothetical protein LOC100267999-3e-8At2g45910protein kinase family protein / U-box domain-containing proteinC.G.S.X.
0.018e+032Zea maysZmAffx.766.1.A1_atAI746089hypothetical protein LOC100191384-3e+0At3g12320unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
LGO:0016567The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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