CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g45450

Gene name ZPR1 (LITTLE ZIPPER 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.36 43.6 At2g45450 819153 ZPR1 (LITTLE ZIPPER 1) ZPR1, a small leucine zipper-containing protein that interacts with REV HD-ZIPIII and is involved in the establishment of leaf polarity. S.X. H.G.
0.55 70.6 At3g10120 820175 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.55 70.6 At5g64530 836574 XND1 F:transcription factor activity;P:multicellular organismal development, shoot development, xylem histogenesis, programmed cell death;C:cellular_component unknown;P S.X. H.G.
0.40 50.8 At1g49320 841355 BURP domain-containing protein F:molecular_function unknown;P:unknown;C:endomembrane system;P S.X. H.G.
0.40 50.8 At4g37970 829953 CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6) F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
360.0 100.0 GSM142625 MC002_ATH1_A1.3-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
300.1 100.0 GSM142631 MC002_ATH1_A3.3-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
287.9 100.0 GSM142624 MC002_ATH1_A1.2-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
231.4 100.0 GSM142623 MC002_ATH1_A1.1-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
212.1 100.0 GSM142629 MC002_ATH1_A3.1-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
162.7 99.9 GSM142630 MC002_ATH1_A3.2-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
136.1 99.9 GSM142636 MC002_ATH1_A5.2-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
96.7 99.9 GSM133721 Deeken_A-1-Deeke-Tum_SLD_REP2 GSE5725 Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
92.8 99.9 GSM161536 Experiment:Dexamethasone induction of GR-REV transgenic Ler seedlings GSE7003 Experiment to identify downstream targets of Arabidopsis REVOLUTA (HDZIPIII) transcription factor.
79.1 99.9 GSM142637 MC002_ATH1_A5.3-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.23 2e-7 56 At3g60890 825260 ZPR2 (LITTLE ZIPPER 2) F:protein binding;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 5e-2 38 At4g38560 830013 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFV C.G. S.X.
0.03 5e-2 38 At3g10480 820212 no apical meristem (NAM) family protein F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;POMFB C.G. S.X.
0.04 5e-2 38 At1g69490 843282 NAP (NAC-like, activated by AP3/PI) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. C.G. S.X.
0.01 2e-1 36 At5g06940 830585 leucine-rich repeat family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.03 2e-1 36 At4g02440 828008 EID1 (EMPFINDLICHER IM DUNKELROTEN LICHT 1) EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Glycine max GmaAffx.66404.1.S1_at AW278767 - - 2e-1 At1g47720 OSB1 (Organellar Single-stranded) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBan01_SQ003_F14_at EBan01_SQ003_F14 - - 7e-1 At5g37580 - C.G. S.X.
0.02 4e-1 36 Oryza sativa OsAffx.31615.1.S1_at - - - 0 C.G. S.X.
0.20 1e-3 44 Populus trichocarpa PtpAffx.202168.1.S1_at pmrna4336 hypothetical protein - 3e-4 At2g45450 ZPR1 (LITTLE ZIPPER 1) C.G. S.X.
0.06 8e-1 34 Triticum aestivum TaAffx.111976.1.S1_at CA629170 - - 4e-1 At2g45450 ZPR1 (LITTLE ZIPPER 1) C.G. S.X.
0.05 2e-1 34 Vitis vinifera 1612558_at CA818826 - - 7e-2 At4g20280 TAF11 (TBP-ASSOCIATED FACTOR 11) C.G. S.X.
0.04 5e+0 30 Zea mays ZmAffx.1149.1.A1_at AW424528 - - 3e+0 At3g07930 HhH-GPD base excision DNA repair family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009943 The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
X GO:0010358 The developmental process that pertains to the organization of a leaf in three-dimensional space once the structure has initially formed.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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