Gene omics information

Query gene ID At2g45430
Gene name DNA-binding protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At2g45430819151DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;PMFBOS.X.H.G.
0.6176.7At4g12080826816DNA-binding family proteinF:DNA binding;P:unknown;C:mitochondrion, nucleolus, nucleus, cytoplasm;PMFOBVS.X.H.G.
0.5570.6At1g22440838850alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAVS.X.H.G.
0.4050.8At1g12160837768flavin-containing monooxygenase family protein / FMO family proteinF:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPAS.X.H.G.
0.3133.8At4g21600828246ENDO5 (endonuclease 5)Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.799.7GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
32.499.7GSM265419Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
26.799.7GSM179963Arabidopsis aux1 mutant roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
26.099.7GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
25.399.6GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
23.199.6GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
22.499.6GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
22.199.6GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
22.099.6GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
21.899.6GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.423e-24113At3g60870825258DNA-binding protein-relatedF:unknown;P:unknown;C:unknown;PBC.G.S.X.
0.184e-1789At4g22810828380DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBFVC.G.S.X.
0.111e-1687At3g04570819613DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;BPMOFVAC.G.S.X.
0.112e-963At4g12050826813DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVC.G.S.X.
0.092e-963At4g17800827502DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOFC.G.S.X.
0.141e-757At2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBOC.G.S.X.
0.031e-448At3g47620823916AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.C.G.S.X.
0.025e-446At5g37790833757protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.062e-344At4g14465827093DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.057e-446Glycine maxGmaAffx.13776.1.S1_atBI321563--6e-4At2g42940DNA-binding family proteinC.G.S.X.
0.034e-342Hordeum vulgareContig21455_atContig21455--1e-11At3g1009040S ribosomal protein S28 (RPS28A)C.G.S.X.
0.044e-344Oryza sativaOs06g0128500AK058563.1-Mitochondrial 39-S ribosomal L47 family protein4e-7At1g07830ribosomal protein L29 family proteinC.G.S.X.
0.201e-552Populus trichocarpaPtpAffx.211474.1.S1_atpmrna22488hypothetical protein-1e-5At2g45430DNA-binding protein-relatedC.G.S.X.
0.038e-342Triticum aestivumTaAffx.52035.1.S1_atCA714343--1e-2At5g61412unknown proteinC.G.S.X.
0.054e-1167Vitis vinifera1621103_atCB003423--2e-12At3g04570DNA-binding protein-relatedC.G.S.X.
0.045e-238Zea maysZmAffx.999.1.S1_atAI881222hypothetical protein LOC100279401-5e-2At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009640The control of plant growth, development, and differentiation by the duration and nature of light, independent of photosynthesis.
XGO:0009647The control of plant growth, development, and differentiation in response to growth in darkness.
XGO:0010228The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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