Gene omics information

Query gene ID At2g45050
Gene name zinc finger (GATA type) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2830.3At2g45050819112zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;FPMOVS.X.H.G.
0.3338.1At1g76500843983SOB3 (SUPPRESSOR OF PHYB-4#3)Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to lightS.X.H.G.
0.3133.8At1g20900838683ESC (ESCAROLA)Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.S.X.H.G.
0.135.8At5g10430830907AGP4 (ARABINOGALACTAN PROTEIN 4)Encodes arabinogalactan-protein (AGP4).S.X.H.G.
0.082.3At1g11545837698xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBOS.X.H.G.
0.051.1At3g16460820894jacalin lectin family proteinF:copper ion binding;P:response to cold;C:cytosol, nucleus, membrane;BOMPFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
44.199.8GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
43.099.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.099.8GSM184890Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
41.999.8GSM226269WT(Ler)_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
41.799.8GSM218289At_NaCl_wermyb23-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
39.799.8GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
37.099.7GSM218298At_NaCl_scm-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
37.099.7GSM218286At_NaCl_Col-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
36.799.7GSM153928ahg3-1 rep1GSE6638Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
36.699.7GSM218290At_NaCl_wermyb23-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.372e-49196At3g60530825224zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMC.G.S.X.
0.117e-961At4g36240829781zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMC.G.S.X.
0.161e-757At4g32890829425zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMC.G.S.X.
0.046e-342At4g34680829620GATA transcription factor 3, putative (GATA-3)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleolus, nucleus;PFOMC.G.S.X.
0.023e-240At3g02810821236protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPBFVAC.G.S.X.
0.023e-240At1g16440838214kinaseF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.073e-240At1g08000837315zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-550Glycine maxGma.1653.1.A1_atBE190451--3e-11At3g54810zinc finger (GATA type) family proteinC.G.S.X.
0.061e-240Hordeum vulgareContig2157_atContig2157--1e-12At4g32890zinc finger (GATA type) family proteinC.G.S.X.
0.038e-136Oryza sativaOsAffx.26110.1.S1_x_at---0C.G.S.X.
0.262e-1377Populus trichocarpaPtpAffx.221042.1.S1_atpmrna37591hypothetical protein-2e-14At2g45050zinc finger (GATA type) family proteinC.G.S.X.
0.034e-136Triticum aestivumTa.26685.1.A1_atCD491573--6e-1At5g04090unknown proteinC.G.S.X.
0.103e-548Vitis vinifera1615028_atCF512306hypothetical protein LOC100244467-5e-20At3g60530zinc finger (GATA type) family proteinC.G.S.X.
0.042e-136Zea maysZm.7914.2.A1_atCF634583GATA transcription factor 25-1e-10At3g21175ZML1 (ZIM-LIKE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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