Gene omics information

Query gene ID At2g44610
Gene name RAB6A
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At2g44610819069RAB6AEncodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.S.X.H.G.
0.6781.6At2g20760816605protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane;MBOPFS.X.H.G.
0.5773.8At4g34960829648peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:Golgi apparatus;BOMFPAVS.X.H.G.
0.4050.8At2g20420816561succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeF:succinate-CoA ligase (GDP-forming) activity, ATP binding;P:response to cadmium ion, metabolic process;C:mitochondrion;OBMFAPS.X.H.G.
0.4050.8At2g45060819113-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMBFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.799.4E-ATMX-31-raw-cel-1516947882
12.799.3E-MEXP-1797-raw-cel-1669768084
12.699.3E-ATMX-31-raw-cel-1516947899
12.499.3E-MEXP-1797-raw-cel-1669768048
11.999.3E-ATMX-31-raw-cel-1516947916
10.999.2E-MEXP-1797-raw-cel-1669767958
10.799.2E-ATMX-13-raw-cel-1556149807
10.699.2E-ATMX-13-raw-cel-1556149919
10.399.2E-MEXP-1797-raw-cel-1669768003
10.299.2E-MEXP-1797-raw-cel-1669768066
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.681e-43176At5g10260830890AtRABH1e (Arabidopsis Rab GTPase homolog H1e)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAC.G.S.X.
0.351e-31137At2g22290816761ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:mitochondrion;MOFPBVAC.G.S.X.
0.467e-30131At4g39890830148AtRABH1c (Arabidopsis Rab GTPase homolog H1c)F:protein binding, GTP binding;P:protein transport, small GTPase mediated signal transduction;C:endomembrane system;MOFPBVAC.G.S.X.
0.342e-859At5g64990836623AtRABH1a (Arabidopsis Rab GTPase homolog H1a)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:mitochondrion;MOFPBAVC.G.S.X.
0.053e-446At1g43890840987ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)ras-related small GTPaseC.G.S.X.
0.035e-342At3g54840824649ARA6Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.453e-42173Glycine maxGma.3568.2.S1_a_atBM308236--3e-42At2g44610RAB6AC.G.S.X.
0.453e-67254Hordeum vulgareContig7349_atContig7349--1e-66At2g44610RAB6AC.G.S.X.
0.515e-63242Oryza sativaOsAffx.16506.1.S1_at---0C.G.S.X.
0.683e-45182Populus trichocarpaPtpAffx.205177.1.S1_atpmrna10251hypothetical protein-4e-93At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)C.G.S.X.
0.451e-59230Triticum aestivumTa.28749.1.S1_a_atCK213968--2e-59At2g44610RAB6AC.G.S.X.
0.545e-102369Vitis vinifera1621785_atCF213480hypothetical protein LOC100242004-2e-101At2g44610RAB6AC.G.S.X.
0.447e-28123Zea maysZm.17714.1.A1_atCF626729--2e-27At2g44610RAB6AC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0032940The controlled release of a substance by a cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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