Gene omics information

Query gene ID At2g44490
Gene name PEN2 (PENETRATION 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At2g44490819056PEN2 (PENETRATION 2)Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance.S.X.H.G.
0.5773.8At4g22690828365CYP706A1member of CYP706AS.X.H.G.
0.4457.2At1g33590840253disease resistance protein-related / LRR protein-relatedF:protein binding;P:signal transduction, defense response;C:cell wall, chloroplast, plant-type cell wall;PMBOFAVS.X.H.G.
0.4050.8At3g19010821434oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:flavonol synthase activity, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMS.X.H.G.
0.3133.8At4g38550830012-F:unknown;P:unknown;C:chloroplast;MFPOBVAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.999.6E-NASC-76-raw-cel-1359878951
19.899.6E-NASC-76-raw-cel-1359879106
18.599.5E-NASC-76-raw-cel-1359879132
18.199.5E-NASC-76-raw-cel-1359878900
16.799.5GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
14.999.4GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
14.799.4E-MEXP-1443-raw-cel-1581869632
14.399.4E-MEXP-547-raw-cel-863346430
14.199.4GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
14.099.4E-NASC-76-raw-cel-1359879158
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-963At1g75940843927ATA27encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.C.G.S.X.
0.056e-859At1g66270842944BGLU21F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFAC.G.S.X.
0.029e-756At1g66280842945BGLU22F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:membrane;BOPMFAC.G.S.X.
0.034e-654At5g24540832525BGLU31 (BETA GLUCOSIDASE 31)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFAC.G.S.X.
0.074e-654At3g09260820082PYK10Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.C.G.S.X.
0.084e-654At3g60120825182BGLU27 (BETA GLUCOSIDASE 27)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFAC.G.S.X.
0.044e-654At3g03640821201BGLU25 (BETA GLUCOSIDASE 25)Encodes beta-glucosidase (GLUC).C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-138Glycine maxGmaAffx.19764.1.A1_atCD400167--1e-6At3g09260PYK10C.G.S.X.
0.034e-136Hordeum vulgareContig2346_atContig2346--2e-2At5g36890BGLU42 (BETA GLUCOSIDASE 42)C.G.S.X.
0.023e-242Oryza sativaOs.22967.1.S1_s_at---0C.G.S.X.
0.063e-757Populus trichocarpaPtpAffx.216821.1.S1_s_atpmrna31856hypothetical protein-3e-8At1g66280BGLU22C.G.S.X.
0.036e-240Triticum aestivumTaAffx.4445.1.S1_atCA741494--1e-3At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.021e+034Vitis vinifera1609480_atCF200781.1hypothetical protein LOC100260940-6e-3At2g21040C2 domain-containing proteinC.G.S.X.
0.021e+034Zea maysZm.2749.1.A1_atAW067078--8e-5At3g18080BGLU44 (B-S GLUCOSIDASE 44)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0042344The chemical reactions and pathways resulting in the breakdown of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.
XGO:0042742Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
XGO:0052544Any process by which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.
XGO:0019760The chemical reactions and pathways involving glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. They are metabolized to a variety of toxic products which are most likely the cause of hepatocytic necrosis in animals and humans.
XGO:0009817A response of an organism to a fungus that prevents the occurrence or spread of disease.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00380Link to KEGG PATHWAYTryptophan metabolism
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage