CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g44460

Gene name BGLU28 (BETA GLUCOSIDASE 28)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.38 46.7 At2g44460 819053 BGLU28 (BETA GLUCOSIDASE 28) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA S.X. H.G.
0.81 90.4 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF S.X. H.G.
0.81 90.4 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO S.X. H.G.
0.79 89.1 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA S.X. H.G.
0.79 89.1 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. S.X. H.G.
0.74 86.1 At5g20790 832202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.69 82.9 At1g19200 838503 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.69 82.9 At2g46880 819301 PAP14 (PURPLE ACID PHOSPHATASE 14) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO S.X. H.G.
0.65 79.6 At1g52940 841727 PAP5 (PURPLE ACID PHOSPHATASE 5) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA S.X. H.G.
0.65 79.6 At1g73010 843632 phosphatase F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
371.3 100.0 GSM270866 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
329.0 100.0 GSM134208 Murray_3-4_D7-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
320.1 100.0 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
307.2 100.0 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
295.5 100.0 E-ATMX-31-raw-cel-1516947916
264.7 100.0 E-ATMX-13-raw-cel-1556149759
227.9 100.0 E-ATMX-13-raw-cel-1556149807
222.2 100.0 GSM134202 Murray_3-1_D1-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
200.5 100.0 GSM134206 Murray_3-3_D5-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
170.9 100.0 GSM142904 WW002_ATH1_A1-willa-CON-REP2 GSE6181 Assembly of the cell wall pectic matrix.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.68 0 906 At2g44470 819054 BGLU29 (BETA GLUCOSIDASE 29) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPOMFA C.G. S.X.
0.54 7e-134 478 At3g60140 825184 DIN2 (DARK INDUCIBLE 2) Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. C.G. S.X.
0.17 6e-8 59 At5g24540 832525 BGLU31 (BETA GLUCOSIDASE 31) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFA C.G. S.X.
0.02 2e-7 57 At1g75940 843927 ATA27 encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. C.G. S.X.
0.17 6e-5 50 At5g24550 832526 BGLU32 (BETA GLUCOSIDASE 32) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFA C.G. S.X.
0.01 1e-3 46 At4g21760 828264 BGLU47 (Beta-glucosidase 47) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
0.04 4e-3 44 At3g21370 821691 BGLU19 (BETA GLUCOSIDASE 19) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 8e-2 40 Glycine max GmaAffx.92992.1.S1_at CF808717 - - 7e-2 At5g54570 BGLU41 (BETA GLUCOSIDASE 41) C.G. S.X.
0.01 4e-1 36 Hordeum vulgare Contig7995_at Contig7995 - - 2e-3 At4g28180 unknown protein C.G. S.X.
0.02 2e+0 36 Oryza sativa OsAffx.8310.1.A1_x_at - - - 0 C.G. S.X.
0.06 5e-3 44 Populus trichocarpa PtpAffx.216821.1.S1_s_at pmrna31856 hypothetical protein - 3e-8 At1g66280 BGLU22 C.G. S.X.
0.02 4e+0 34 Triticum aestivum TaAffx.29684.1.S1_at CA637281 - - 1e+0 At2g44460 BGLU28 (BETA GLUCOSIDASE 28) C.G. S.X.
0.03 7e-5 48 Vitis vinifera 1622281_at CD715637 hypothetical LOC100250160 - 2e-11 At2g44450 BGLU15 (BETA GLUCOSIDASE 15) C.G. S.X.
0.01 6e+0 32 Zea mays Zm.17694.1.S1_at CK370322 - - 5e+0 At3g22230 60S ribosomal protein L27 (RPL27B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00412 Glycoside Hydrolase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00380 Tryptophan metabolism
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