CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g44370

Gene name DC1 domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At2g44370 819044 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF S.X. H.G.
0.82 90.9 At3g46280 823773 protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBO S.X. H.G.
0.82 90.9 At4g22470 828342 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA S.X. H.G.
0.80 89.8 At1g51800 841606 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
0.78 88.6 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO S.X. H.G.
0.71 84.2 At1g49000 841322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.67 81.6 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. S.X. H.G.
0.67 81.6 At2g39200 818505 MLO12 (MILDEW RESISTANCE LOCUS O 12) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). S.X. H.G.
0.52 67.4 At1g51790 841605 kinase F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.50 65.3 At2g42360 818837 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
265.9 100.0 E-NASC-76-raw-cel-1359878900
205.5 100.0 E-NASC-76-raw-cel-1359878976
193.3 100.0 E-NASC-76-raw-cel-1359879158
192.8 100.0 E-MEXP-1094-raw-cel-1379507273
185.4 100.0 E-MEXP-1094-raw-cel-1379507313
153.2 99.9 GSM128686 Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
123.6 99.9 GSM142851 MG001_ATH1_A4-Torres-2N1 GSE6176 Impact of Type III effectors on plant defense responses
122.4 99.9 E-MEXP-807-raw-cel-1173273116
119.2 99.9 GSM142852 MG001_ATH1_A5-Torres-2N3 GSE6176 Impact of Type III effectors on plant defense responses
110.8 99.9 E-MEXP-807-raw-cel-1173273060
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.50 3e-82 305 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO C.G. S.X.
0.53 9e-33 141 At5g40590 834057 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;POF C.G. S.X.
0.18 5e-19 95 At2g28270 817373 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO C.G. S.X.
0.33 2e-18 93 At2g44380 819045 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PMO C.G. S.X.
0.23 3e-17 89 At2g44390 819046 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PO C.G. S.X.
0.09 3e-14 79 At5g43520 834372 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF C.G. S.X.
0.01 2e-2 40 At1g55440 841991 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;BMPOFVA C.G. S.X.
0.01 9e-2 38 At2g26890 817230 GRV2 (GRAVITROPISM DEFECTIVE 2) GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Glycine max Gma.8903.1.S1_at BU761031 - - 3e+0 At1g26762 unknown protein C.G. S.X.
0.03 3e+0 32 Hordeum vulgare EBro02_SQ006_I14_at EBro02_SQ006_I14 - - 6e-1 At3g61111 structural constituent of ribosome C.G. S.X.
0.03 1e+1 32 Oryza sativa OsAffx.5593.1.S1_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.210745.1.S1_at pmrna21077 hypothetical protein - 4e-1 At3g30320 unknown protein C.G. S.X.
0.03 6e+0 32 Triticum aestivum TaAffx.113470.1.S1_at CA611642 - - 3e+0 At2g44370 DC1 domain-containing protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1610984_at CF211158 hypothetical protein LOC100259256 - 1e+0 At1g14200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 1e+1 30 Zea mays Zm.8857.1.A1_at BM348256 - - 4e+0 At5g53200 TRY (TRIPTYCHON) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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