CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g44010

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.61 76.7 At2g44010 819006 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.75 86.9 At2g44380 819045 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PMO S.X. H.G.
0.72 84.8 At2g21045 816639 - F:unknown;P:aging;C:unknown;BOPAFM S.X. H.G.
0.71 84.2 At2g42350 818836 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV S.X. H.G.
0.69 82.9 At5g43350 834353 PHT1 Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation. S.X. H.G.
0.67 81.6 At1g78000 844135 SULTR1 Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes. S.X. H.G.
0.67 81.6 At2g29995 817550 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.56 73.0 At3g54040 824571 photoassimilate-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.53 68.6 At1g31885 840079 transporter F:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAV S.X. H.G.
0.47 61.2 At4g25090 828612 respiratory burst oxidase, putative / NADPH oxidase, putative F:in 7 functions;P:oxidation reduction;C:cytosolic ribosome, vacuole;MFPBOA S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
82.8 99.9 E-MEXP-828-raw-cel-1156922684
67.4 99.8 GSM157339 Coates_1-11_Col-3_Rep3_ATH1 GSE6826 Identification of candidate Arabidillo target genes in Arabidopsis
67.4 99.8 E-MEXP-828-raw-cel-1156922368
61.3 99.8 GSM157334 Coates_1-6_ara1OX_Rep2_ATH1 GSE6826 Identification of candidate Arabidillo target genes in Arabidopsis
60.5 99.8 GSM290758 root - 01% oxygen - 48h - A GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
58.0 99.8 E-MEXP-828-raw-cel-1156922296
57.7 99.8 GSM291124 root - 21% oxygen - 48h - F GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
56.2 99.8 GSM291024 root - 08% oxygen - 48h - A GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
55.9 99.8 GSM291119 root - 21% oxygen - 48h - A GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
53.5 99.8 GSM157330 Coates_1-2_ara1OX_Rep1_ATH1 GSE6826 Identification of candidate Arabidillo target genes in Arabidopsis
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.24 1e-1 36 At3g59880 825158 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P C.G. S.X.
0.02 1e-1 36 At1g24170 839030 LGT9 Encodes a protein with putative galacturonosyltransferase activity. C.G. S.X.
0.02 6e-1 34 At3g11680 820340 unknown protein F:unknown;P:unknown;C:unknown;BPFO C.G. S.X.
0.01 2e+0 32 At5g41120 834114 esterase/lipase/thioesterase family protein F:catalytic activity, acyltransferase activity;P:metabolic process;C:cellular_component unknown;BPMO C.G. S.X.
0.02 2e+0 32 At5g56180 835717 ATARP8 (ACTIN-RELATED PROTEIN 8) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. C.G. S.X.
0.02 2e+0 32 At5g12050 831078 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFB C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 8e-1 34 Glycine max HgAffx.15614.1.S1_at CB281381 - - 2e-4 At2g44690 ARAC9 C.G. S.X.
0.03 4e+0 30 Hordeum vulgare Contig20919_at Contig20919 - - 5e+0 At3g62820 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 5e+0 32 Oryza sativa Os12g0603100 9640.m04015 - - 3e-1 At1g80580 ethylene-responsive element-binding family protein C.G. S.X.
0.04 1e+1 30 Populus trichocarpa PtpAffx.249.656.A1_a_at CV230534 - - 3e-1 At5g45790 ubiquitin thiolesterase C.G. S.X.
0.04 9e+0 30 Triticum aestivum TaAffx.64861.1.A1_at BJ272089 - - 2e-1 At4g34360 protease-related C.G. S.X.
0.04 7e-1 32 Vitis vinifera 1610255_at BQ800016 - - 3e+0 At4g26570 ATCBL3 (ARABIDOPSIS THALIANA CALCINEURIN B-LIKE 3) C.G. S.X.
0.04 4e+0 30 Zea mays ZmAffx.634.1.A1_at AI715062 - - 3e+0 At5g40981 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage