Gene omics information

Query gene ID At2g43800
Gene name formin homology 2 domain-containing protein / FH2 domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7687.4At2g43800818984formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MPFOBVAS.X.H.G.
0.7788.0At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.S.X.H.G.
0.6982.9At5g43020834317leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.6378.1At4g14200827060unknown proteinF:unknown;P:biological_process unknown;C:unknown;MBOFPAS.X.H.G.
0.6176.7At3g61310825303DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.6176.7At4g38660830022thaumatin, putativeF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOVS.X.H.G.
0.6075.7At3g05470819712formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:endomembrane system;MPOFVBAS.X.H.G.
0.6075.7At4g29360829057glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, anchored to membrane;PFOBS.X.H.G.
0.5974.7At3g02640821289unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.5974.7At4g33260829462CDC20.2putative cdc20 protein (CDC20.2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
66.399.8GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
52.599.8GSM270868Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
45.099.8GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
35.199.7E-MEXP-682-raw-cel-922397560
31.599.7E-MEXP-682-raw-cel-922397611
31.099.7E-MEXP-682-raw-cel-922397577
30.099.7GSM142661MB002_ATH1_A1-Eland-ch1GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
29.699.7E-MEXP-682-raw-cel-922397594
26.699.7E-MEXP-682-raw-cel-922397645
26.599.7GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.039e-859At3g05470819712formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:endomembrane system;MPOFVBAC.G.S.X.
0.031e-656At5g67470836883formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:in 7 components;MPOFBVAC.G.S.X.
0.106e-654At3g25500822136AFH1 (FORMIN HOMOLOGY 1)Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.C.G.S.X.
0.012e-552At1g70140843350ATFH8 (formin 8)Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.C.G.S.X.
0.011e-346At4g30350829158heat shock protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFAMC.G.S.X.
0.011e-346At3g19680821505unknown proteinF:unknown;P:unknown;C:plasma membrane;OPMBFC.G.S.X.
0.012e-242At5g49530835014SIN-like family proteinF:DNA-directed RNA polymerase activity;P:transcription;C:nucleus;MOFPBC.G.S.X.
0.012e-242At4g26130828719unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOFC.G.S.X.
0.012e-242At3g07020819887UDP-glucose:sterol glucosyltransferase (UGT80A2)F:transferase activity, transferring glycosyl groups;P:lipid glycosylation, carbohydrate metabolic process, metabolic process;C:plasma membrane, membrane;BMFPOVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-448Glycine maxGmaAffx.61549.1.S1_atAI437770--4e-6At5g67470formin homology 2 domain-containing protein / FH2 domain-containing proteinC.G.S.X.
0.037e-446Hordeum vulgareContig11031_atContig11031--3e-3At5g67470formin homology 2 domain-containing protein / FH2 domain-containing proteinC.G.S.X.
0.043e-346Oryza sativaOs01g0897700AK061290.1-Formin-like protein2e-37At3g25500AFH1 (FORMIN HOMOLOGY 1)C.G.S.X.
0.132e-1999Populus trichocarpaPtpAffx.213760.1.S1_s_atpmrna26870hypothetical protein-5e-20At2g43800formin homology 2 domain-containing protein / FH2 domain-containing proteinC.G.S.X.
0.026e-344Triticum aestivumTa.4352.2.S1_a_atBJ261195CRC-related protein-9e-3At1g69180CRC (CRABS CLAW)C.G.S.X.
0.063e-859Vitis vinifera1609174_atCF403273hypothetical protein LOC100252716-5e-48At3g25500AFH1 (FORMIN HOMOLOGY 1)C.G.S.X.
0.012e-344Zea maysZm.8477.1.S1_atCD991129VAMP protein SEC22-3e+0At3g12090TET6 (TETRASPANIN6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0016043A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.
LGO:0030036A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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