Gene omics information

Query gene ID At2g43570
Gene name chitinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At2g43570818959chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMVS.X.H.G.
0.5773.8At1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.S.X.H.G.
0.5773.8At2g14610815949PR1 (PATHOGENESIS-RELATED GENE 1)PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.S.X.H.G.
0.5773.8At2g18660816381EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.S.X.H.G.
0.5570.6At3g57260824893BGL2 (BETA-1,3-GLUCANASE 2)beta 1,3-glucanaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
85.299.9E-ATMX-25-raw-cel-1441077482
65.199.8E-ATMX-25-raw-cel-1441077500
62.399.8E-ATMX-25-raw-cel-1441077517
60.499.8E-MEXP-173-raw-cel-357965520
56.599.8GSM268245dor-drought-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
51.499.8GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
46.099.8GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
45.399.8GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
34.499.7E-MEXP-739-raw-cel-1099467330
34.199.7E-ATMX-27-raw-cel-1441080508
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.073e-550At2g43590818961chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMVC.G.S.X.
0.023e-240At5g27150832773NHX1 (NA+/H+ EXCHANGER)Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.C.G.S.X.
0.054e-136At3g54420824608ATEP3encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.C.G.S.X.
0.012e+034At4g00360828019CYP86A2 (CYTOCHROME P450 86 A2)Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.C.G.S.X.
0.022e+034At4g20810827829transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family proteinF:RNA polymerase II transcription factor activity, transcription initiation factor activity;P:transcription initiation from RNA polymerase II promoter;C:transcription factor TFIIE complex;MFPOBVAC.G.S.X.
0.012e+034At4g20340827782RNA polymerase II transcription factor/ transcription initiation factorF:RNA polymerase II transcription factor activity, transcription initiation factor activity;P:transcription initiation from RNA polymerase II promoter;C:endomembrane system, transcription factor TFIIE complex;MOFPVBAC.G.S.X.
0.022e+034At4g32490829384plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PBOVMFAC.G.S.X.
0.012e+034At3g05030819665NHX2 (SODIUM HYDROGEN EXCHANGER 2)member of Sodium proton exchanger familyC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-136Glycine maxHgAffx.8628.1.S1_atCB379873--3e-1At5g03050unknown proteinC.G.S.X.
0.048e-134Hordeum vulgareContig2518_s_atContig2518--6e-1At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.058e-136Oryza sativaOs04g0494100AB096140.1-Endochitinase A precursor (EC 3.2.1.14) (Seedchitinase A)1e-1At2g43590chitinase, putativeC.G.S.X.
0.054e-240Populus trichocarpaPtpAffx.77318.1.S1_x_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeC.G.S.X.
0.044e-136Triticum aestivumTa.5873.1.S1_x_atCD910379--5e-1At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.048e-340Vitis vinifera1617192_atAY137377.1class IV chitinase-4e-2At2g43570chitinase, putativeC.G.S.X.
0.057e-134Zea maysZm.201.1.S1_atL16798.1class I acidic chitinase-8e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0016998The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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