CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g43535

Gene name trypsin inhibitor, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g43535 818955 trypsin inhibitor, putative Encodes a defensin-like (DEFL) family protein. S.X. H.G.
0.75 86.9 At2g39310 818516 JAL22 (JACALIN-RELATED LECTIN 22) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.67 81.6 At4g29270 829048 acid phosphatase class B family protein F:acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBO S.X. H.G.
0.53 68.6 At3g16450 820893 jacalin lectin family protein F:molecular_function unknown;P:response to cold;C:nucleus;PO S.X. H.G.
0.44 57.2 At3g16390 820886 NSP3 (NITRILE SPECIFIER PROTEIN 3) Encodes a nitrile-specifier protein NSP3. NSP3 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation. S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
49.6 99.8 GSM131195 AtGen_D-29_2-BS_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
41.4 99.8 E-MEXP-791-raw-cel-1122937569
38.5 99.8 GSM131202 AtGen_D-36_3-RL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
38.4 99.8 E-MEXP-791-raw-cel-1122937533
36.8 99.7 E-MEXP-791-raw-cel-1122937587
36.3 99.7 GSM131208 AtGen_D-42_3-FS_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
36.3 99.7 GSM131194 AtGen_D-28_2-RS_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
36.1 99.7 GSM131197 AtGen_D-31_2-US_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
35.2 99.7 GSM131177 AtGen_D-9_1-DS_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
34.7 99.7 GSM131210 AtGen_D-44_3-RS_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.54 2e-28 125 At2g43510 818952 ATTI1 Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. C.G. S.X.
0.35 7e-19 93 At1g47540 841163 trypsin inhibitor, putative F:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;PO C.G. S.X.
0.34 4e-14 77 At2g43520 818953 ATTI2 Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family. C.G. S.X.
0.35 4e-5 48 At2g43530 818954 trypsin inhibitor, putative Encodes a defensin-like (DEFL) family protein. C.G. S.X.
0.02 6e-1 34 At3g44600 823585 CYP71 (CYCLOPHILIN71) Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3. C.G. S.X.
0.02 2e+0 32 At5g45220 834558 Toll-Interleukin-Resistance (TIR) domain-containing protein F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P C.G. S.X.
0.03 2e+0 32 At4g16800 827386 enoyl-CoA hydratase, putative F:enoyl-CoA hydratase activity, catalytic activity;P:fatty acid metabolic process, metabolic process;C:cellular_component unknown;BOMFPA C.G. S.X.
0.01 2e+0 32 At3g42670 823287 CHR38 (CHROMATIN REMODELING 38) Encodes a nuclear localized SNF domain containing protein involved in RNA silencing. Mutants were identified in a screen for defects in the spread of RNA silencing. CLSY1 may affect production of dsRNA from the locus to be silenced. C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Glycine max Gma.17330.1.S1_at BE823802 - - 1e-13 At5g60550 GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2) C.G. S.X.
0.04 2e+1 28 Hordeum vulgare Contig19768_at Contig19768 - - 5e+0 At4g29850 unknown protein C.G. S.X.
0.05 4e+0 32 Oryza sativa OsAffx.31384.1.S1_at - - - 0 C.G. S.X.
0.03 8e-1 34 Populus trichocarpa PtpAffx.88869.1.A1_at CV248897 hypothetical protein - 2e-86 At5g53480 importin beta-2, putative C.G. S.X.
0.05 2e+0 32 Triticum aestivum TaAffx.37318.1.A1_at BJ286092 - - 3e+0 At5g40847 unknown protein C.G. S.X.
0.04 7e-1 32 Vitis vinifera 1608597_at CD801670 - - 4e+0 At4g11760 LCR17 (Low-molecular-weight cysteine-rich 17) C.G. S.X.
0.02 4e+0 30 Zea mays Zm.6894.1.A1_at BM380620 - - 7e-47 At1g69830 AMY3 (ALPHA-AMYLASE-LIKE 3) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage