CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g43510

Gene name ATTI1

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.27 26.2 At2g43510 818952 ATTI1 Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. S.X. H.G.
0.35 41.6 At3g18250 821353 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFO S.X. H.G.
0.33 38.1 At5g38900 833882 DSBA oxidoreductase family protein F:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMA S.X. H.G.
0.20 14.4 At3g51660 824329 macrophage migration inhibitory factor family protein / MIF family protein F:molecular_function unknown;P:inflammatory response, response to other organism;C:peroxisome;MPOB S.X. H.G.
0.20 14.4 At4g21120 827860 AAT1 (AMINO ACID TRANSPORTER 1) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. S.X. H.G.
0.18 11.4 At5g46350 834678 WRKY8 member of WRKY Transcription Factor; Group II-c S.X. H.G.
0.15 7.8 At1g65690 842880 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.13 5.8 At3g04070 819562 anac047 (Arabidopsis NAC domain containing protein 47) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P S.X. H.G.
0.13 5.8 At5g26340 832703 MSS1 Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. S.X. H.G.
0.03 0.6 At3g49780 824140 ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR) Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
61.7 99.8 GSM205159 protoplast_KIN10_rep1 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
60.7 99.8 E-MEXP-1443-raw-cel-1581869688
47.1 99.8 GSM151703 gh3.5-1D 48 hpi, biological replicate 1 GSE6556 Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
46.6 99.8 GSM205156 protoplast_controlDNA_rep1 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
45.3 99.8 E-ATMX-31-raw-cel-1516948018
44.1 99.8 GSM133808 Diamond_A-1-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
43.4 99.8 GSM245913 csn5 (csn5a-2 csn5b) mutant light replicate 1 GSE9728 COP9 signalosome (csn) mutant analysis
41.5 99.8 GSM245915 csn5 (csn5a-2 csn5b) mutant light replicate 3 GSE9728 COP9 signalosome (csn) mutant analysis
39.7 99.8 GSM151705 gh3.5-1D 48 hpi, biological replicate 3 GSE6556 Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
39.1 99.8 GSM133809 Diamond_A-2-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.54 2e-28 125 At2g43535 818955 trypsin inhibitor, putative Encodes a defensin-like (DEFL) family protein. C.G. S.X.
0.28 6e-13 73 At2g43520 818953 ATTI2 Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family. C.G. S.X.
0.44 1e-7 56 At1g47540 841163 trypsin inhibitor, putative F:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;PO C.G. S.X.
0.08 1e-1 36 At3g30845 822868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.04 1e-1 36 At1g64080 842712 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPV C.G. S.X.
0.02 5e-1 34 At5g39471 6241265 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMO C.G. S.X.
0.01 5e-1 34 At5g02400 830937 PLL2 Encodes a protein with similarity to the POL locus which is a novel protein phosphatase 2C. Ubiquitously expressed. No phenotype observed in homozygous null mutant background. C.G. S.X.
0.03 5e-1 34 At4g21190 827867 emb1417 (embryo defective 1417) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;POMB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-2 40 Glycine max PsAffx.psHA003iE02r_s_at PsAffx.psHA003iE02r - - 7e-5 At4g14465 DNA-binding protein-related C.G. S.X.
0.07 4e+0 30 Hordeum vulgare HF21N04r_at HF21N04r - - 2e+0 At4g19150 ankyrin repeat family protein C.G. S.X.
0.04 1e+0 34 Oryza sativa Os.46351.1.A1_at - - - 0 C.G. S.X.
0.05 3e+0 32 Populus trichocarpa PtpAffx.27419.2.A1_at CK096272 hypothetical protein - 2e-1 At2g25735 unknown protein C.G. S.X.
0.04 2e+0 32 Triticum aestivum TaAffx.30299.1.S1_at CA626382 - - 4e+0 At5g24310 ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) C.G. S.X.
0.05 2e+0 30 Vitis vinifera 1616494_at CB974636 - - 2e+0 Atmg00690 - C.G. S.X.
0.04 3e+0 30 Zea mays ZmAffx.229.1.A1_at AI670241 - - 5e-2 At3g58190 LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0050832 Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
S GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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