Gene omics information

Query gene ID At2g43050
Gene name ATPMEPCRD
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2319.3At2g43050818907ATPMEPCRDF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMS.X.H.G.
0.6781.6At5g44440834471FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMS.X.H.G.
0.6176.7At5g53980835481ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.S.X.H.G.
0.5065.3At4g35720829724unknown proteinF:unknown;P:unknown;C:unknown;POS.X.H.G.
0.5065.3At5g57240835830ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
95.399.9GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatments
93.999.9GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatments
84.799.9GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatments
84.099.9GSM131214AtGen_D-48_3-WS_REP3_ATH1GSE5617AtGenExpress: Light treatments
82.999.9GSM131211AtGen_D-45_3-BS_REP3_ATH1GSE5617AtGenExpress: Light treatments
82.299.9GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatments
81.899.9GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatments
81.799.9GSM131195AtGen_D-29_2-BS_REP2_ATH1GSE5617AtGenExpress: Light treatments
81.099.9GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatments
79.899.9GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.367e-69262At3g59010825070pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.038e-446At1g11580837701PMEPCRA (METHYLESTERASE PCR A)F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plasma membrane, plant-type cell wall;PBFMOC.G.S.X.
0.013e-344At5g64640836585pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:plasma membrane, plant-type cell wall;PBFOMC.G.S.X.
0.063e-344At1g53830841820ATPME2encodes a pectin methylesteraseC.G.S.X.
0.023e-344At1g53840841821ATPME1encodes a pectin methylesteraseC.G.S.X.
0.021e-242At2g47670819380invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.021e-242At2g47550819368pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.035e-240At5g51490835223pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOMC.G.S.X.
0.035e-240At3g06830819867pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-242Glycine maxGmaAffx.26348.1.S1_atBE474551--7e-3At2g43050ATPMEPCRDC.G.S.X.
0.036e+032Hordeum vulgareContig13318_atContig13318--1e-2At3g59010pectinesterase family proteinC.G.S.X.
0.032e-346Oryza sativaOs01g0312500AK105998.1-Pectin methylesterase isoform alpha (EC 3.1.1.11)(Fragment)2e-2At3g14310ATPME3C.G.S.X.
0.047e-240Populus trichocarpaPtpAffx.9932.2.A1_a_atCA927911hypothetical protein-1e-4At1g53830ATPME2C.G.S.X.
0.023e-344Triticum aestivumTa.3826.1.S1_atBJ254574--2e-3At2g47040VGD1 (VANGUARD1)C.G.S.X.
0.026e-548Vitis vinifera1615574_atCB977067hypothetical protein LOC100245304-7e-9At2g45220pectinesterase family proteinC.G.S.X.
0.034e-756Zea maysZm.12262.1.S1_atCA826732--5e-2At3g06830pectinesterase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00400Link to KaPPA-View 4Homogalacturonan degradation
00422Link to KaPPA-View 4Carbohydrate esterases
00442Link to KaPPA-View 4Rhamnogalacturonan II degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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