Gene omics information

Query gene ID At2g43000
Gene name anac042 (Arabidopsis NAC domain containing protein 42)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At2g43000818902anac042 (Arabidopsis NAC domain containing protein 42)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.6781.6At5g11210830991ATGLR2.5member of Putative ligand-gated ion channel subunit familyS.X.H.G.
0.4050.8At5g40990834101GLIP1 (GDSL LIPASE1)Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.S.X.H.G.
0.2115.8At3g60120825182BGLU27 (BETA GLUCOSIDASE 27)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFAS.X.H.G.
0.071.9At5g13080831147WRKY75WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
474.1100.0GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
324.5100.0GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
223.6100.0GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
206.3100.0GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
113.899.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
98.699.9GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
77.199.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
69.099.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
61.299.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
58.799.8GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.217e-1271At3g12910820475transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.044e-756At5g39820833978anac094 (Arabidopsis NAC domain containing protein 94)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMC.G.S.X.
0.033e-550At5g61430836264ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.041e-448At4g10350826627ANAC070 (Arabidopsis NAC domain containing protein 70)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.031e-448At2g46770819290EMB2301 (EMBRYO DEFECTIVE 2301)NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.C.G.S.X.
0.084e-446At3g15170820748CUC1 (CUP-SHAPED COTYLEDON1)Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed.C.G.S.X.
0.052e-344At5g66300836762NAC105 (NAC DOMAIN CONTAINING PROTEIN 105)Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.C.G.S.X.
0.092e-344At1g26870837796FEZ (FEZ)F:transcription factor activity;P:multicellular organismal development, response to auxin stimulus, root cap development, somatic stem cell division, positive regulation of asymmetric cell division;C:nucleus;PC.G.S.X.
0.057e-342At5g46590834702anac096 (Arabidopsis NAC domain containing protein 96)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.144e-550Glycine maxGmaAffx.30791.1.S1_atBE330831--8e-5At3g12910transcription factorC.G.S.X.
0.023e+032Hordeum vulgareHVSMEg0005B12r2_atHVSMEg0005B12r2--1e+0At3g54300ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727)C.G.S.X.
0.139e-756Oryza sativaOs07g01382009635.m00387--6e-7At2g43000anac042 (Arabidopsis NAC domain containing protein 42)C.G.S.X.
0.236e-1065Populus trichocarpaPtpAffx.205672.1.S1_atpmrna11198NAC domain protein, IPR003441-3e-10At2g43000anac042 (Arabidopsis NAC domain containing protein 42)C.G.S.X.
0.067e-342Triticum aestivumTaAffx.52152.1.S1_atCA712210--4e-3At2g43000anac042 (Arabidopsis NAC domain containing protein 42)C.G.S.X.
0.189e-1579Vitis vinifera1613141_atCF518362hypothetical protein LOC100259242-2e-14At2g43000anac042 (Arabidopsis NAC domain containing protein 42)C.G.S.X.
0.027e-134Zea maysZm.14456.2.S1_a_atCA399302allyl alcohol dehydrogenase-like protein-2e-5At2g36620RPL24A (ribosomal protein L24)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage