Gene omics information

Query gene ID At2g42190
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2319.3At2g42190818819unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBAS.X.H.G.
0.3846.7At3g16750820927unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPAVS.X.H.G.
0.2930.3At5g409203771388-F:unknown;P:unknown;C:unknownS.X.H.G.
0.2217.5At4g31030829230unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2217.5At5g03130831922unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
166.7100.0GSM311288Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
133.799.9GSM311287Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
115.499.9E-MEXP-509-raw-cel-829148456
110.499.9E-MEXP-509-raw-cel-829148597
110.499.9E-MEXP-509-raw-cel-829148525
96.599.9E-MEXP-509-raw-cel-829148808
88.299.9E-MEXP-509-raw-cel-829148420
87.799.9E-MEXP-509-raw-cel-829148348
75.199.9E-MEXP-509-raw-cel-829148842
72.199.9E-MEXP-509-raw-cel-829148632
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.416e-1787At3g57930824962unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBVC.G.S.X.
0.032e-136At5g60850836206OBP4Encodes a zinc finger protein.C.G.S.X.
0.052e-136At4g049576240683-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e-136At3g11240820295ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2)Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.C.G.S.X.
0.032e-136At1g02330839367-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAC.G.S.X.
0.022e-136At1g80310844371sulfate transmembrane transporterF:sulfate transmembrane transporter activity;P:response to salt stress;C:vacuole;BOPFMAC.G.S.X.
0.028e-134At5g42970834312COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.C.G.S.X.
0.038e-134At5g41160834118ATPUP12Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e+034Glycine maxGmaAffx.77698.1.S1_atBE021406--9e-1At2g42190unknown proteinC.G.S.X.
0.044e-134Hordeum vulgareContig11876_atContig11876--6e-2At2g06990HEN2 (hua enhancer 2)C.G.S.X.
0.042e+034Oryza sativaOs11g02678009639.m01531--9e-1At2g42190unknown proteinC.G.S.X.
0.097e-238Populus trichocarpaPtpAffx.249.532.A1_atCV240888hypothetical protein-8e-2At2g42190unknown proteinC.G.S.X.
0.043e+032Triticum aestivumTaAffx.78206.1.S1_atCA735983--3e+0At2g42190unknown proteinC.G.S.X.
0.041e+032Vitis vinifera1606633_atCD801002--2e+0At2g42190unknown proteinC.G.S.X.
0.031e+032Zea maysZm.15089.1.S1_atCN845421hypothetical protein LOC100275959-6e+0At5g55680glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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