Gene omics information

Query gene ID At2g42060
Gene name CHP-rich zinc finger protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7486.1At2g42060818806CHP-rich zinc finger protein, putativeF:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMS.X.H.G.
0.7788.0At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAS.X.H.G.
0.7184.2At5g43350834353PHT1Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.S.X.H.G.
0.6176.7At3g51350824298aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAVS.X.H.G.
0.5673.0At2g29995817550unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5570.6At1g78000844135SULTR1Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.S.X.H.G.
0.5469.5At1g31885840079transporterF:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAVS.X.H.G.
0.4253.9At2g28960817445leucine-rich repeat protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
129.099.9E-MEXP-828-raw-cel-1156922485
104.499.9GSM157324Hammond_3-17_Potassium-starved-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
103.099.9E-MEXP-828-raw-cel-1156922467
102.899.9E-MEXP-828-raw-cel-1156922509
100.199.9E-MEXP-828-raw-cel-1156922416
99.099.9E-MEXP-828-raw-cel-1156922455
90.099.9E-MEXP-828-raw-cel-1156922923
85.699.9E-MEXP-828-raw-cel-1156922386
85.699.9E-MEXP-828-raw-cel-1156922968
78.299.9GSM157327Hammond_3-11_Potassium-starved-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At4g34060829552DML3 (DEMETER-LIKE PROTEIN 3)Encodes a protein with 5-meC and thymine-DNA glycosylase activity with a preference for CpG and CpHpG sequences. Involved in maintaining methylation marks.C.G.S.X.
0.014e-136At5g65683836695zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;OMPFBAC.G.S.X.
0.024e-136At3g01210821275nucleic acid binding / oxidoreductaseF:oxidoreductase activity, nucleic acid binding;P:oxidation reduction;C:cellular_component unknown;PFOMC.G.S.X.
0.014e-136At3g22380821807TIC (TIME FOR COFFEE)Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action.C.G.S.X.
0.024e-136At1g70480843384unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POBC.G.S.X.
0.022e+034At4g24160828516hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOMFPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240Glycine maxGma.6652.1.S1_atBQ627489--1e-2At2g42060CHP-rich zinc finger protein, putativeC.G.S.X.
0.033e+032Hordeum vulgareContig17715_atContig17715NBS-LRR disease resistance protein homologue-3e+0At3g55210anac063 (Arabidopsis NAC domain containing protein 63)C.G.S.X.
0.033e+034Oryza sativaOsAffx.17473.1.S1_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.205114.1.S1_atpmrna10124cc-nbs resistance protein-1e+0At2g42060CHP-rich zinc finger protein, putativeC.G.S.X.
0.032e+034Triticum aestivumTaAffx.121548.1.S1_atCA601895--4e+0At5g42965nucleic acid binding / ribonuclease HC.G.S.X.
0.025e-134Vitis vinifera1621595_atCD003807hypothetical protein LOC100261592-1e+0At5g01790unknown proteinC.G.S.X.
0.023e+032Zea maysZm.16530.1.A1_atBM953023--3e-51At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0007242A series of reactions within the cell that occur as a result of a single trigger reaction or compound.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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