Gene omics information

Query gene ID At2g42000
Gene name plant EC metallothionein-like family 15 protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7687.4At2g42000818800plant EC metallothionein-like family 15 proteinF:zinc ion binding;P:biological_process unknown;C:unknown;PMOBFS.X.H.G.
0.9396.4At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.9296.0At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.9095.1At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9095.1At2g42560818856late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.8994.6At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8994.6At5g42290834234transcription activator-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.8994.6At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
0.8894.0At3g05260819690short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.8894.0At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1125.8100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
1021.4100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
385.3100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
271.9100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
212.1100.0GSM133312RIKEN-LI1BGSE5701AtGenExpress: Basic hormone treatment of seeds
204.8100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
202.2100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
167.7100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
166.5100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
157.499.9GSM133318RIKEN-LI4BGSE5701AtGenExpress: Basic hormone treatment of seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.702e-41169At2g23240816856plant EC metallothionein-like family 15 proteinF:zinc ion binding;P:biological_process unknown;C:unknown;POMBC.G.S.X.
0.017e-134At3g16857820940ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.C.G.S.X.
0.023e+032At5g62070836327IQD23 (IQ-domain 23)F:calmodulin binding;P:unknown;C:unknown;PMOFC.G.S.X.
0.033e+032At4g35390829692AGF1 (AT-hook protein of GA feedback 1)F:transcription factor activity;P:negative regulation of gibberellic acid mediated signaling;C:nucleus;POBMFAVC.G.S.X.
0.023e+032At3g60470825218unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.021e+130At5g23940832459EMB3009 (embryo defective 3009)F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxGmaAffx.64695.1.S1_atBM528166--8e-1At4g02871unknown proteinC.G.S.X.
0.053e-134Hordeum vulgarerbaal3p07_s_atrbaal3p07--6e-1At2g42000plant EC metallothionein-like family 15 proteinC.G.S.X.
0.063e-136Oryza sativaOs12g05710009640.m03722-Metallothionein-like protein type 11e-1At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)C.G.S.X.
0.054e+032Populus trichocarpaPtpAffx.50031.2.A1_atDN484504hypothetical protein-1e+0At1g27695glycine-rich proteinC.G.S.X.
0.062e-136Triticum aestivumTaAffx.28833.1.S1_s_atCA655690--2e-1At2g42000plant EC metallothionein-like family 15 proteinC.G.S.X.
0.123e-959Vitis vinifera1613608_atCB916843--2e-8At2g42000plant EC metallothionein-like family 15 proteinC.G.S.X.
0.034e+030Zea maysZm.947.1.A1_atBF733123--2e-2At3g17180scpl33 (serine carboxypeptidase-like 33)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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