CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g41880

Gene name GK-1 (GUANYLATE KINASE 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.70 83.5 At2g41880 818788 GK-1 (GUANYLATE KINASE 1) Guanylate kinase. Involved in nucleotide metabolism. S.X. H.G.
0.67 81.6 At4g01960 828190 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.67 81.6 At1g04985 839352 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.63 78.1 At1g36050 840509 unknown protein F:molecular_function unknown;P:fatty acid biosynthetic process;C:plasma membrane;MOFP S.X. H.G.
0.62 77.3 At1g79660 844305 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.61 76.7 At1g12750 837831 ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6) F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOMPFA S.X. H.G.
0.60 75.7 At2g01450 814673 ATMPK17 member of MAP Kinase S.X. H.G.
0.60 75.7 At1g15920 838162 CCR4-NOT transcription complex protein, putative F:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOF S.X. H.G.
0.59 74.7 At1g19110 838494 inter-alpha-trypsin inhibitor heavy chain-related F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, membrane;MBOPFA S.X. H.G.
0.58 73.8 At3g50910 824255 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
58.8 99.8 E-MEXP-285-raw-cel-440782725
52.0 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
32.6 99.7 GSM131160 AtGen_C-10_1-Pi-6_REP1_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
32.1 99.7 GSM322549 genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 22 factorial design
30.6 99.7 GSM131161 AtGen_C-11_2-Pi-6_REP2_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
29.5 99.7 E-MEXP-285-raw-cel-440782791
28.1 99.7 GSM322554 genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 22 factorial design
25.7 99.7 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
22.7 99.6 GSM131395 AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1 GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
21.7 99.6 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.70 0 652 At3g57550 824922 AGK2 (GUANYLATE KINASE) guanylate kinase C.G. S.X.
0.01 6e-1 36 At5g55400 835633 fimbrin-like protein, putative F:actin binding;P:unknown;C:vacuole;MOFPBA C.G. S.X.
0.02 6e-1 36 At5g65220 836647 ribosomal protein L29 family protein F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:ribosome, chloroplast stroma, chloroplast, nucleoid, chloroplast envelope;BOPFM C.G. S.X.
0.02 6e-1 36 At4g35160 829668 O-methyltransferase family 2 protein F:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFMO C.G. S.X.
0.02 6e-1 36 At3g29035 822547 ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3) Encodes a protein with transcription factor activity. Note: this protein (AT3G29035) on occasion has also been referred to as AtNAC3, not to be confused with the AtNAC3 found at locus AT3G15500. C.G. S.X.
0.01 2e+0 34 At5g44690 834498 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA C.G. S.X.
0.01 2e+0 34 At5g08470 830746 PEX1 (peroxisome 1) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. C.G. S.X.
0.01 2e+0 34 At5g59020 836019 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 2e-23 111 Glycine max Gma.4878.1.S1_at BI969436 - - 1e-26 At3g57550 AGK2 (GUANYLATE KINASE) C.G. S.X.
0.03 7e-2 38 Hordeum vulgare Contig11517_at Contig11517 - - 5e-2 At3g57550 AGK2 (GUANYLATE KINASE) C.G. S.X.
0.13 8e-5 50 Oryza sativa Os12g0515600 AK071160.1 - Guanylate kinase (EC 2.7.4.8) 6e-5 At2g41880 GK-1 (GUANYLATE KINASE 1) C.G. S.X.
0.18 7e-23 109 Populus trichocarpa PtpAffx.161461.1.S1_at CV130586 hypothetical protein - 1e-49 At3g57550 AGK2 (GUANYLATE KINASE) C.G. S.X.
0.14 6e-4 46 Triticum aestivum TaAffx.88783.2.S1_at CA601577 - - 3e-4 At2g41880 GK-1 (GUANYLATE KINASE 1) C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1619463_s_at CF372216 - - 8e-23 At2g40205 60S ribosomal protein L41 (RPL41C) C.G. S.X.
0.06 2e-5 50 Zea mays Zm.12090.1.A1_at BM379981 guanylate kinase - 3e-5 At2g41880 GK-1 (GUANYLATE KINASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0009117 The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates).
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00002 Purine metabolism

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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