Gene omics information

Query gene ID At2g41810
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g41810818780-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBS.X.H.G.
0.9396.4At2g43890818993polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAS.X.H.G.
0.7486.1At3g59850825155polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAVS.X.H.G.
0.6781.6At2g24400816976auxin-responsive protein, putative / small auxin up RNA (SAUR_D)F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POS.X.H.G.
0.4761.2At1g05650837072polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAVS.X.H.G.
0.3846.7At4g01630827983ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17)member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)S.X.H.G.
0.3643.6At2g43880818992polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAVS.X.H.G.
0.3235.7At4g31320829259auxin-responsive protein, putative / small auxin up RNA (SAUR_C)F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
402.5100.0GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
191.3100.0GSM184842Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
185.3100.0GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
176.8100.0GSM218291At_Standard_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
176.4100.0GSM265420Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
173.5100.0GSM184841Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with salt
159.499.9GSM218293At_NaCl_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
146.299.9GSM218294At_NaCl_cpctry-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
139.499.9GSM218292At_Standard_cpctry-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
133.199.9GSM218298At_NaCl_scm-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.686e-84311At2g41800818779-F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;PC.G.S.X.
0.034e-240At3g08030819994unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cell wall;PBC.G.S.X.
0.011e-138At5g32470833206-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;BOFAPMC.G.S.X.
0.021e-138At5g11420831013-F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;PC.G.S.X.
0.016e-136At5g55280835621FTSZ1-1Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.C.G.S.X.
0.016e-136At4g00400828140GPAT8 (glycerol-3-phosphate acyltransferase 8)Involved in cutin assembly. Is functional redundant of GPAT4.C.G.S.X.
0.012e+034At5g49910835054CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2)heat shock protein 70 (Hsc70-7); nuclearC.G.S.X.
0.022e+034At3g15900820833unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+034Glycine maxGmaAffx.71777.1.S1_atBE346992--9e-1At5g04270zinc ion bindingC.G.S.X.
0.023e-136Hordeum vulgareHVSMEh0096B14f_atHVSMEh0096B14f--2e-2At1g29790-C.G.S.X.
0.024e+034Oryza sativaOs12g04402009640.m02411-Zn-finger, CCHC type domain containing protein4e+0At3g45160unknown proteinC.G.S.X.
0.092e-448Populus trichocarpaPtpAffx.158656.1.A1_a_atCV256722hypothetical protein-2e-4At2g41810-C.G.S.X.
0.029e+032Triticum aestivumTaAffx.78768.1.S1_atCA727586--4e+0At5g48205zinc ion bindingC.G.S.X.
0.036e-134Vitis vinifera1611041_s_atCF372662hypothetical protein LOC100252175-4e-1At1g19140-C.G.S.X.
0.029e-134Zea maysZm.6416.1.S1_atBQ744568hypothetical protein LOC100277106-3e+0At5g22880HTB2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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