Gene omics information

Query gene ID At2g41380
Gene name embryo-abundant protein-related
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2522.6At2g41380818736embryo-abundant protein-relatedF:methyltransferase activity;P:response to cadmium ion;C:mitochondrion;BPFOMAS.X.H.G.
0.6781.6At1g08430837363ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).S.X.H.G.
0.6781.6At3g16330820880unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2014.4At2g02680814797DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFS.X.H.G.
0.103.4At2g15760816070calmodulin-binding proteinF:calmodulin binding;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
63.999.8GSM142906WW002_ATH1_A2-willa-ISOX-REP2GSE6181Assembly of the cell wall pectic matrix.
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-138At5g56300835729GAMT2 (GIBBERELLIC ACID METHYLTRANSFERASE 2)A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.C.G.S.X.
0.024e-136At4g13310826961CYP71A20putative cytochrome P450C.G.S.X.
0.024e-136At4g13290826959CYP71A19putative cytochrome P450C.G.S.X.
0.014e-136At2g04865815033unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBVFC.G.S.X.
0.024e-136At1g64450842753proline-rich family proteinF:unknown;P:unknown;C:unknown;MBOPFVAC.G.S.X.
0.012e+034At5g23850832450-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBVAC.G.S.X.
0.012e+034At5g41220834124ATGSTT3 (GLUTATHIONE S-TRANSFERASE THETA 3)Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.022e+034At5g02750831806zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.066e-446Glycine maxGmaAffx.91037.1.S1_s_atCF806762--4e-4At2g41380embryo-abundant protein-relatedC.G.S.X.
0.038e-134Hordeum vulgareEBpi07_SQ002_E08_atEBpi07_SQ002_E08--4e+0At3g30220unknown proteinC.G.S.X.
0.035e-240Oryza sativaOs05g04397509633.m03398--1e-2At2g41380embryo-abundant protein-relatedC.G.S.X.
0.032e+034Populus trichocarpaPtp.5027.1.S1_atCF228912hypothetical protein-2e-8At2g30170catalyticC.G.S.X.
0.034e-136Triticum aestivumTa.7160.2.A1_atBJ318737--1e+0At3g02950-C.G.S.X.
0.042e-652Vitis vinifera1620276_atCF605672hypothetical protein LOC100253741-9e-6At2g41380embryo-abundant protein-relatedC.G.S.X.
0.022e-136Zea maysZm.17408.1.A1_atBE129731hypothetical protein LOC100273071-4e-1At2g41380embryo-abundant protein-relatedC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046686A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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