CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g41190

Gene name amino acid transporter family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g41190 818718 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAV S.X. H.G.
0.80 89.8 At1g07430 837255 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV S.X. H.G.
0.78 88.6 At3g13672 820573 seven in absentia (SINA) family protein F:molecular_function unknown;P:multicellular organismal development, ubiquitin-dependent protein catabolic process;C:nucleus;MPO S.X. H.G.
0.63 78.1 At5g59220 836040 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBV S.X. H.G.
0.61 76.7 At2g46680 819280 ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response. S.X. H.G.
0.61 76.7 At3g61890 825362 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems. S.X. H.G.
0.56 73.0 At5g15190 831371 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.56 73.0 At5g57050 835809 ABI2 (ABA INSENSITIVE 2) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. S.X. H.G.
0.55 70.6 At2g25625 817103 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
310.4 100.0 GSM269821 WT leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
260.2 100.0 GSM131299 AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
251.9 100.0 GSM131303 AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
239.9 100.0 GSM269829 WT leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
236.8 100.0 GSM269823 T6 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
226.4 100.0 GSM269819 C2 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
200.6 100.0 GSM269827 C2 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
200.0 100.0 GSM269825 T8 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
164.9 100.0 GSM131304 AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
154.2 99.9 GSM131300 AtGen_6-2512_Osmoticstress-Shoots-12.0h_Rep2 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.03 1e-2 42 At5g02180 831862 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:chloroplast, membrane;MPFOBAV C.G. S.X.
0.03 5e-2 40 At3g09330 820089 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBVA C.G. S.X.
0.01 5e-2 40 At3g48380 823996 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP C.G. S.X.
0.01 2e-1 38 At5g11790 831051 Ndr family protein F:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPOB C.G. S.X.
0.03 2e-1 38 At3g09340 820090 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBVA C.G. S.X.
0.01 2e-1 38 At3g55320 824698 PGP20 (P-GLYCOPROTEIN 20) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:nucleus, plasma membrane;BOMFAPV C.G. S.X.
0.01 2e-1 38 At2g39480 818533 PGP6 (P-GLYCOPROTEIN 6) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:nucleus, plasma membrane;BOMFAPV C.G. S.X.
0.01 8e-1 36 At5g18070 831926 DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 34 Glycine max GmaAffx.57503.2.S1_at BG316375 - - 2e-1 At1g14160 integral membrane family protein C.G. S.X.
0.04 6e-3 42 Hordeum vulgare Contig8340_at Contig8340 - - 8e-3 At2g41190 amino acid transporter family protein C.G. S.X.
0.09 3e-11 71 Oryza sativa Os02g0788800 AK060825.1 - Amino acid/polyamine transporter II family protein 1e-5 At2g41190 amino acid transporter family protein C.G. S.X.
0.22 4e-22 107 Populus trichocarpa PtpAffx.206061.1.S1_at pmrna12012 - - 3e-22 At2g41190 amino acid transporter family protein C.G. S.X.
0.05 9e-10 65 Triticum aestivum Ta.17796.1.S1_at CA624397 - - 3e-10 At2g41190 amino acid transporter family protein C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1612574_s_at CF511613 hypothetical protein LOC100250803 - 1e+0 At5g18050 auxin-responsive protein, putative C.G. S.X.
0.06 6e-6 52 Zea mays Zm.17272.1.S1_at CK371238 - - 8e-6 At2g41190 amino acid transporter family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006865 The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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