Gene omics information

Query gene ID At2g41070
Gene name EEL (ENHANCED EM LEVEL)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9095.1At2g41070818706EEL (ENHANCED EM LEVEL)Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.S.X.H.G.
0.9095.1At1g03890839379cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;PBMOS.X.H.G.
0.8994.6At4g26740828781ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27.S.X.H.G.
0.8894.0At4g271508288232S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.8793.5At1g03880839383CRU2 (CRUCIFERIN 2)Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
0.8793.5At5g59170836035proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MPOBFVAS.X.H.G.
0.8793.5At1g54860841925unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.8793.5At5g07190830610ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.S.X.H.G.
0.8693.1At3g60730825244pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMS.X.H.G.
0.8693.1At4g271408288222S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
247.8100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
222.8100.0GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
214.6100.0GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
194.0100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
184.1100.0GSM311288Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
181.0100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
176.8100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
162.699.9GSM10453WT Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
159.799.9GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
146.099.9GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.471e-47190At3g56850824852AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.C.G.S.X.
0.062e-1273At4g35900829744FDbZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia.C.G.S.X.
0.071e-757At2g17770816286ATBZIP27Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.C.G.S.X.
0.072e-654At1g03970839356GBF4encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.C.G.S.X.
0.052e-344At2g36270818199ABI5 (ABA INSENSITIVE 5)Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.C.G.S.X.
0.023e-240At5g57120835816-F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOBFPVAC.G.S.X.
0.041e-138At1g49720841395ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1)Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-136Glycine maxGmaAffx.46819.2.S1_atBM524950transcription factor bZIP81-5e-2At5g44080bZIP transcription factor family proteinC.G.S.X.
0.072e-1995Hordeum vulgareContig10705_atContig10705--9e-13At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)C.G.S.X.
0.078e-136Oryza sativaOsAffx.27272.1.S1_at---0C.G.S.X.
0.132e-1273Populus trichocarpaPtpAffx.206017.1.S1_atpmrna11925hypothetical protein-4e-10At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)C.G.S.X.
0.051e-1687Triticum aestivumTa.29331.1.S1_atCK168067FD-like 6 protein-3e-16At2g41070EEL (ENHANCED EM LEVEL)C.G.S.X.
0.052e-342Vitis vinifera1619029_atCF403690hypothetical protein LOC100243434-1e-14At4g34000ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)C.G.S.X.
0.043e+032Zea maysZmAffx.621.1.A1_atAI715049--3e+0At2g41070EEL (ENHANCED EM LEVEL)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0009738A series of molecular signals mediated by the detection of abscisic acid.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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