Gene omics information

Query gene ID At2g40440
Gene name BTB/POZ domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g40440818638BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.9095.1At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8491.9At4g02970828121AT7SL-1 (Arabidopsis 7SL RNA 1)Signal recognition particle. Type 4 of RNA polymerase III dependent genes.S.X.H.G.
0.8190.4At3g57900824959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At2g01500814678PFS2 (PRETTY FEW SEEDS 2)PFS2 encodes a homeodomain gene that is a member of the WUS clade of transcription factors. It delays differentiation and maturation of primordia and regulates ovule patterning. The pfs2 mutant exhibits developmental defects in the maternal integuments and gametophyte, specifically, the boundary between the chalaza and the nucellus shifted towards the distal end of pfs2 ovule primordia. In addition, leaves displayed curling and petals were wavy and crenulated. Overexpression of PFS2 affects floral organ and leaf development. Single- and double-mutant analyses reveal that PFS2 activity represses AGAMOUS expression in young floral primordia. Also involved in regulation of response to low temperature.S.X.H.G.
0.8089.8At2g33160817877glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity, nucleic acid binding;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAS.X.H.G.
0.8089.8At5g14560831307unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7788.0At3g28280822454-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7486.1At2g13640815849Golgi GDP mannose transporter (GONST1)F:unknown;P:transcription;C:nucleus;OMBPFVAS.X.H.G.
0.7486.1At1g52430841674ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;POBMFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
372.3100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
344.3100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
342.4100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
314.9100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
311.7100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
310.6100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
298.7100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
295.7100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
291.4100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
275.2100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.451e-49196At3g29740822660protein bindingF:protein binding;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.244e-25115At4g04090825720speckle-type POZ protein-relatedF:protein binding;P:unknown;C:cellular_component unknown;MPOVC.G.S.X.
0.176e-21101At2g40450818639speckle-type POZ protein-relatedF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVFC.G.S.X.
0.252e-859At5g48510834907speckle-type POZ protein-relatedF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVC.G.S.X.
0.135e-652At2g05330815081speckle-type POZ protein-relatedF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOC.G.S.X.
0.027e-238At5g47810834832PFK2 (PHOSPHOFRUCTOKINASE 2)F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAVC.G.S.X.
0.023e-136At3g28660822496pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Glycine maxGmaAffx.34059.1.A1_atCD413130--7e-1At2g45403unknown proteinC.G.S.X.
0.022e+032Hordeum vulgareContig1516_s_atContig1516--3e-72At5g62700TUB3C.G.S.X.
0.039e+032Oryza sativaOs11g04835009639.m02651--9e-1At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)C.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.120657.1.A1_atCV270560--3e-1At2g40440BTB/POZ domain-containing proteinC.G.S.X.
0.041e+034Triticum aestivumTaAffx.80800.1.S1_atCA692403--6e-1At2g40440BTB/POZ domain-containing proteinC.G.S.X.
0.031e+032Vitis vinifera1617967_atCD801706--3e+0At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)C.G.S.X.
0.041e-136Zea maysZm.11862.1.A1_atAW566292hypothetical protein LOC100275637-2e-1At2g40440BTB/POZ domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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