Gene omics information

Query gene ID At2g39830
Gene name DAR2 (DA1-RELATED PROTEIN 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g39830818570DAR2 (DA1-RELATED PROTEIN 2)F:zinc ion binding;P:unknown;C:chloroplast;MOPFBS.X.H.G.
0.9195.6At5g18970832015AWPM-19-like membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;PS.X.H.G.
0.9195.6At1g65910842903anac028 (Arabidopsis NAC domain containing protein 28)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMS.X.H.G.
0.9195.6At4g33490829486aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;POMFS.X.H.G.
0.9095.1At1g06490837160ATGSL07 (glucan synthase-like 7)encodes a gene similar to callose synthaseS.X.H.G.
0.9095.1At1g02950838240ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.8994.6At1g11915837741unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8994.6At1g63310842637-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8994.6At2g466303768746unknown proteinF:unknown;P:unknown;C:chloroplastS.X.H.G.
0.8994.6At5g04680830346-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
916.8100.0GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
686.9100.0GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
661.7100.0GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
522.7100.0GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
122.499.9GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
110.699.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
96.299.9GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
81.499.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
34.899.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
32.599.7GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At5g53430835424SDG29 (SET DOMAIN GROUP 29)Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.C.G.S.X.
0.022e-138At3g24535822049unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.022e-138At3g26740822286CCL (CCR-LIKE)transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.C.G.S.X.
0.012e-138At3g21950821753methyltransferaseF:methyltransferase activity;P:response to cadmium ion;C:cellular_component unknown;POBMFC.G.S.X.
0.012e-138At3g50370824199unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
0.012e-138At1g04360839540zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVC.G.S.X.
0.012e-138At1g04500839510zinc finger CONSTANS-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.018e-136At5g50650835135WD-40 repeat family protein / St12p protein, putativeF:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;BMFOPAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-138Glycine maxGma.2633.2.S1_atBE329874--5e-45At4g36860zinc ion bindingC.G.S.X.
0.066e-342Hordeum vulgareContig20846_atContig20846--3e-6At4g36860zinc ion bindingC.G.S.X.
0.023e-242Oryza sativaOsAffx.22229.1.S1_at---0C.G.S.X.
0.371e-34149Populus trichocarpaPtpAffx.209318.1.S1_atpmrna18412hypothetical protein-5e-35At2g39830DAR2 (DA1-RELATED PROTEIN 2)C.G.S.X.
0.048e-136Triticum aestivumTa.3302.1.S1_atBJ209906--4e-4At5g66610DAR7 (DA1-RELATED PROTEIN 7)C.G.S.X.
0.044e-342Vitis vinifera1609571_atBQ795107hypothetical protein LOC100258119-6e-12At4g36860zinc ion bindingC.G.S.X.
0.021e+034Zea maysZm.9097.1.A1_atBM266610--1e+0At2g17640ATSERAT3C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage