Gene omics information

Query gene ID At2g39400
Gene name hydrolase, alpha/beta fold family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5873.8At2g39400818525hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOPMFVAS.X.H.G.
0.3643.6At5g23490832415unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFS.X.H.G.
0.3541.6At1g55450841992embryo-abundant protein-relatedF:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOAS.X.H.G.
0.3235.7At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
0.2830.3At1g03740839423ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MPOFBVAS.X.H.G.
0.2726.2At1g08930837414ERD6 (EARLY RESPONSE TO DEHYDRATION 6)encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.S.X.H.G.
0.2726.2At1g33590840253disease resistance protein-related / LRR protein-relatedF:protein binding;P:signal transduction, defense response;C:cell wall, chloroplast, plant-type cell wall;PMBOFAVS.X.H.G.
0.2726.2At1g68840843216RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)S.X.H.G.
0.2726.2At3g19010821434oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:flavonol synthase activity, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.499.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.771e-127456At3g55180824684esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:cellular_component unknown;BOPMFVAC.G.S.X.
0.242e-1997At2g39420818527esterase/lipase/thioesterase family proteinF:catalytic activity;P:unknown;C:unknown;BOPMFVAC.G.S.X.
0.078e-1271At2g39410818526hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BPOMVAC.G.S.X.
0.075e-446At3g55190824685esterase/lipase/thioesterase family proteinF:catalytic activity;P:glycerol biosynthetic process;C:cellular_component unknown;BOPMFVAC.G.S.X.
0.063e-240At2g47630819376esterase/lipase/thioesterase family proteinF:catalytic activity;P:unknown;C:plasma membrane;BPOMFVAC.G.S.X.
0.025e-136At5g46915834737transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PBOC.G.S.X.
0.015e-136At3g48195823976phox (PX) domain-containing proteinF:protein binding, phosphoinositide binding;P:intracellular signaling cascade, cell communication;C:unknown;MOPBFC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-1067Glycine maxGma.15059.2.S1_s_atAW620699--7e-5At2g39410hydrolase, alpha/beta fold family proteinC.G.S.X.
0.039e-134Hordeum vulgareContig19569_atContig19569--5e-4At2g39420esterase/lipase/thioesterase family proteinC.G.S.X.
Os02g05027000.034e+0Oryza sativaOs11g0151466---0C.G.S.X.
0.033e-344Populus trichocarpaPtpAffx.158724.1.S1_atBP922027--2e-15At3g62860esterase/lipase/thioesterase family proteinC.G.S.X.
0.032e-344Triticum aestivumTa.9743.2.S1_x_atBJ229529--1e+0At5g46620unknown proteinC.G.S.X.
0.041e-136Vitis vinifera1608981_atCF209511hypothetical protein LOC100260284-2e-4At2g39410hydrolase, alpha/beta fold family proteinC.G.S.X.
0.038e-134Zea maysZm.6790.1.A1_atAI396367shugoshin-1-3e+0At2g05335SCRL15 (SCR-Like 15)C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage