Gene omics information

Query gene ID At2g39370
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At2g39370818522unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOS.X.H.G.
0.8391.4At2g14960815985GH3.1encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.S.X.H.G.
0.8391.4At3g58190824988LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)This gene contains two auxin-responsive element (AuxRE).S.X.H.G.
0.8089.8At2g42440818844-F:unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6781.6At1g59500842240GH3.4encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.S.X.H.G.
0.5773.8At5g26930832751zinc finger (GATA type) family proteinF:transcription factor activity, sequence-specific DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
651.9100.0GSM75510Col-0 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
590.5100.0GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
440.8100.0GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
434.7100.0GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
81.699.9GSM179973Arabidopsis roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
73.899.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
67.699.9GSM9619i5i6i19_+IAA_3GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
64.699.8GSM9618i5i6i19_+IAA_2GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
64.599.8GSM9607iaa17-6_+IAA_3GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
62.199.8GSM179974Arabidopsis roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.088e-342At2g37380818314unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBC.G.S.X.
0.031e-138At2g22750816805basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOC.G.S.X.
0.031e-138At1g49400841363emb1129 (embryo defective 1129)F:structural constituent of ribosome;P:embryonic development ending in seed dormancy, translation;C:cytosolic small ribosomal subunit, ribosome, intracellular;BOAPFMC.G.S.X.
0.035e-136At5g505626240680unknown proteinF:unknown;P:unknown;C:unknownC.G.S.X.
0.015e-136At5g41730834176protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOFBVAC.G.S.X.
0.015e-136At5g49820835045emb1879 (embryo defective 1879)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PMFOC.G.S.X.
0.025e-136At4g14910827149imidazoleglycerol-phosphate dehydratase, putativeF:imidazoleglycerol-phosphate dehydratase activity;P:histidine biosynthetic process;C:chloroplast;BOFAPMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-242Glycine maxGma.1816.2.S1_atAI461081--4e-4At5g26230unknown proteinC.G.S.X.
0.039e-134Hordeum vulgareContig21869_atContig21869--2e+0At3g53120VPS37-1C.G.S.X.
0.031e+036Oryza sativaOsAffx.4392.1.S1_at---0C.G.S.X.
0.085e-859Populus trichocarpaPtpAffx.209363.1.S1_atpmrna18541hypothetical protein-4e-8At2g39370unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.27984.1.S1_atCA667047--8e-1At2g39370unknown proteinC.G.S.X.
0.036e-134Vitis vinifera1613299_s_atCF568796--3e-6At2g34070unknown proteinC.G.S.X.
0.025e-238Zea maysZm.17679.1.A1_atCK369820--3e-1At4g18070unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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