Gene omics information

Query gene ID At2g37980
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At2g37980818376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMS.X.H.G.
0.4050.8At4g00110828145GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.S.X.H.G.
0.3846.7At2g40620818657bZIP transcription factor family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFBS.X.H.G.
0.3133.8At5g16480831509tyrosine specific protein phosphatase family proteinF:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FOPBMS.X.H.G.
0.2930.3At3g24530822048AAA-type ATPase family protein / ankyrin repeat family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:chloroplast;MOBFPVAS.X.H.G.
0.2726.2At3g11690820341unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.1912.7At5g61980836319AGD1 (ARF-GAP domain 1)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD1 belongs to the class 1, together with AGD2, AGD3 and AGD4. Not expressed in hypocotyls and cotyledons.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
108.699.9GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
105.799.9GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
84.799.9GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
81.699.9GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
80.999.9GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6301011At3g54100824577unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.082e-1171At5g01100831831unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.041e-346At5g35570833522unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMC.G.S.X.
0.011e-242At3g56460824813oxidoreductase, zinc-binding dehydrogenase family proteinF:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOFMPAVC.G.S.X.
0.016e-240At1g67420843062peptidaseF:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPAC.G.S.X.
0.012e-138At1g22460838852unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.011e+036At5g09740830834HAM2 (histone acetyltransferase of the MYST family 2)Encodes an enzyme with histone acetyltransferase activity. HAM2 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM2.C.G.S.X.
0.011e+036At4g35240829677unknown proteinF:unknown;P:N-terminal protein myristoylation;C:plasma membrane;PMFOBVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.161e-1069Glycine maxGmaAffx.87383.1.S1_atBM527475--6e-11At3g54100unknown proteinC.G.S.X.
0.022e+034Hordeum vulgareContig4961_s_atContig4961--5e+0At4g39730lipid-associated family proteinC.G.S.X.
0.115e-757Oryza sativaOs05g0451900AK071872.1-Axi 1 (Auxin-independent growth promoter)-likeprotein3e-7At2g37980unknown proteinC.G.S.X.
0.287e-27123Populus trichocarpaPtpAffx.213593.1.S1_atpmrna26548hypothetical protein-6e-32At3g54100unknown proteinC.G.S.X.
0.024e+034Triticum aestivumTaAffx.5108.1.S1_atCA721648--2e+0At3g56790RNA splicing factor-relatedC.G.S.X.
0.023e-136Vitis vinifera1616271_atCD713125--5e-3At5g01100unknown proteinC.G.S.X.
0.025e-1065Zea maysZm.1662.1.A1_atCF626953--6e-1At5g35570unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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