Gene omics information

Query gene ID At2g37940
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g37940818371-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPS.X.H.G.
0.7586.9At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
0.7586.9At5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationS.X.H.G.
0.6781.6At1g22280838835protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, plasma membrane;PMOBFVAS.X.H.G.
0.6781.6At3g12740820456ALIS1 (ALA-INTERACTING SUBUNIT 1)Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.399.8GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
38.299.8E-NASC-76-raw-cel-1359878951
32.899.7GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
30.099.7GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
27.099.7GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
26.099.7GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
26.099.7GSM39204Col_Chitin2GSE2169rre1 and rre2 mutants
25.899.7E-NASC-76-raw-cel-1359879132
24.399.6GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
23.799.6GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.810753At3g54020824569phosphatidic acid phosphatase-related / PAP2-relatedF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOPC.G.S.X.
0.125e-446At2g29525817501-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBC.G.S.X.
0.035e-136At3g4459082358460S acidic ribosomal protein P2 (RPP2D)F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, nucleus;MFPOAC.G.S.X.
0.015e-136At3g53840824551protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.022e+034At5g63170836438GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.012e+034At5g61350836256protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-1997Glycine maxGma.7768.2.S1_atBM891062--1e-19At2g37940-C.G.S.X.
0.044e-652Hordeum vulgareContig20371_atContig20371--9e-6At3g54020phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.206e-1169Oryza sativaOs05g0287800AK071727.1-Conserved hypothetical protein7e-11At2g37940-C.G.S.X.
0.405e-1789Populus trichocarpaPtp.3736.1.A1_atCV256427hypothetical protein-3e-24At3g54020phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.051e-138Triticum aestivumTa.9266.2.S1_atCA637287--2e-3At3g54020phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.321e-26119Vitis vinifera1621632_atBQ794172hypothetical protein LOC100266611-9e-28At3g54020phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
0.144e-1271Zea maysZm.17912.1.S1_atBU050922hypothetical protein LOC100273314-6e-7At3g54020phosphatidic acid phosphatase-related / PAP2-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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