Gene omics information

Query gene ID At2g37870
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At2g37870818363protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.6781.6At4g33550829494lipid bindingF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.4457.2At5g59220836040protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBVS.X.H.G.
0.2930.3At1g69260843257AFP1 (ABI FIVE BINDING PROTEIN)F:unknown;P:abscisic acid mediated signaling;C:nucleus;POMFS.X.H.G.
0.2522.6At2g41190818718amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAVS.X.H.G.
0.082.3At3g53980824565protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.061.4At3g57010824868strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
165.8100.0GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
139.199.9E-ATMX-31-raw-cel-1516947984
131.599.9GSM184936Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
122.599.9GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
119.699.9GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
115.699.9GSM75508Col-0 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
115.499.9GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
106.599.9GSM184935Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
102.799.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
96.399.9GSM131327AtGen_6-3611_Saltstress-Shoots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-136At3g17240820984mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)lipoamide dehydrogenase precursorC.G.S.X.
0.037e-134At5g48080---C.G.S.X.
0.107e-134At5g05960830481protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.047e-134At5g49440835004unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.027e-134At3g56750824842unknown proteinF:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;POC.G.S.X.
0.047e-134At3g18030821327ATHAL3Aflavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).C.G.S.X.
0.013e+032At5g52910835368ATIM (TIMELESS)homolog of Drosophila timelessC.G.S.X.
0.013e+032At5g36870833654ATGSL09 (glucan synthase-like 9)encodes a gene similar to callose synthaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.069e-134Glycine maxGmaAffx.93419.1.S1_atCF809144--4e-1At2g37870protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.035e+030Hordeum vulgareContig4098_atContig4098--7e-2At3g45300IVD (ISOVALERYL-COA-DEHYDROGENASE)C.G.S.X.
0.045e+032Oryza sativaOs02g04906009630.m02756--4e+0At4g09840unknown proteinC.G.S.X.
0.106e-238Populus trichocarpaPtpAffx.52660.1.S1_atBU893589hypothetical protein-8e-2At2g37870protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.052e-136Triticum aestivumTaAffx.107388.2.S1_s_atCA634125cysteine protease-2e-1At2g37870protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.041e+128Vitis vinifera1619868_atCF414710hypothetical protein LOC100260310-3e+0At3g57960emsy N terminus domain-containing protein / ENT domain-containing proteinC.G.S.X.
0.042e+128Zea maysZmAffx.391.1.A1_atAI676819--1e-2At2g25685SCRL17 (SCR-Like 17)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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