Gene omics information

Query gene ID At2g37730
Gene name fringe-related protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g37730818350fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PFMOS.X.H.G.
0.7184.2At5g44270834450-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.6478.9At1g437153767310transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5065.3At4g077903769958transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5065.3At4g13610826994MEE57 (maternal effect embryo arrest 57)F:protein binding, DNA binding, DNA (cytosine-5-)-methyltransferase activity;P:embryonic development ending in seed dormancy, DNA methylation;C:nucleus;BOMPAFVS.X.H.G.
0.4659.8At3g308303769152transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.4355.3At3g422203769425transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.4050.8At5g332603771121transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.3338.1At4g38070829963bHLH family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:mitochondrion;MOBFPAVS.X.H.G.
0.3338.1At5g35830833569ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOBPFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
500.3100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
486.7100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
332.7100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
199.7100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
190.2100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
187.6100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
127.899.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
127.699.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
126.199.9GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
125.099.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.048e-446At5g41460834147fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;MPFOC.G.S.X.
0.012e-138At4g12020826810WRKY19member of MEKK subfamilyC.G.S.X.
0.018e-136At5g49460835006ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)C.G.S.X.
0.018e-136At4g24140828514hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:endomembrane system;BOMPFAVC.G.S.X.
0.028e-136At4g18310827557unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.018e-136At4g18320827558unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.018e-136At3g27010822318AT-TCP20Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes.C.G.S.X.
0.018e-136At3g46740823827TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III)Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGmaAffx.69369.1.S1_atBG511072--2e-1At4g11350transferase, transferring glycosyl groupsC.G.S.X.
0.026e+032Hordeum vulgareContig5807_s_atContig5807--2e-1At1g52330unknown proteinC.G.S.X.
0.024e-138Oryza sativaOs.16920.1.S1_at---0C.G.S.X.
0.145e-963Populus trichocarpaPtpAffx.206261.1.S1_s_atpmrna12423hypothetical protein-3e-9At2g37730fringe-related proteinC.G.S.X.
0.032e-138Triticum aestivumTaAffx.23746.1.S1_atCA731030--1e-4At3g11420fringe-related proteinC.G.S.X.
0.029e-134Vitis vinifera1617540_atCF210948--4e+0At2g28105-C.G.S.X.
0.023e-136Zea maysZmAffx.1527.1.S1_at40794996-123--8e-1At3g13710PRA1.F4 (PRENYLATED RAB ACCEPTOR 1.F4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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