CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g37430

Gene name zinc finger (C2H2 type) family protein (ZAT11)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.91 95.6 At2g37430 818319 zinc finger (C2H2 type) family protein (ZAT11) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOF S.X. H.G.
0.91 95.6 At5g24110 832476 WRKY30 member of WRKY Transcription Factor; Group III S.X. H.G.
0.83 91.4 At1g30370 839917 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMV S.X. H.G.
0.80 89.8 At1g22810 838887 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. S.X. H.G.
0.73 85.5 At3g23220 821900 DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. S.X. H.G.
0.57 73.8 At4g28460 828963 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
515.7 100.0 E-MEXP-807-raw-cel-1173273223
441.0 100.0 E-MEXP-807-raw-cel-1173273252
423.8 100.0 E-MEXP-807-raw-cel-1173273144
400.4 100.0 E-MEXP-807-raw-cel-1173273060
370.7 100.0 E-MEXP-807-raw-cel-1173273170
356.0 100.0 E-MEXP-807-raw-cel-1173273116
272.0 100.0 E-MEXP-807-raw-cel-1173273196
233.3 100.0 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
223.3 100.0 E-MEXP-807-raw-cel-1173273088
157.6 99.9 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 2e-5 50 At5g04390 830318 zinc finger (C2H2 type) family protein F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;PMO C.G. S.X.
0.22 3e-4 46 At3g53600 824528 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMF C.G. S.X.
0.03 1e-3 44 At3g10470 820211 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;OMPFB C.G. S.X.
0.03 4e-3 42 At3g60580 825229 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOF C.G. S.X.
0.03 4e-3 42 At2g45120 819119 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFVB C.G. S.X.
0.04 7e-2 38 At2g28710 817420 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMO C.G. S.X.
0.03 1e+0 34 At4g35280 829681 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPO C.G. S.X.
0.03 1e+0 34 At1g26590 839199 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPBFV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-3 44 Glycine max GmaAffx.90234.1.S1_at CF805959 - - 1e-3 At2g37430 zinc finger (C2H2 type) family protein (ZAT11) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HVSMEa0009M20r2_x_at HVSMEa0009M20r2 - - 9e+0 At5g40370 glutaredoxin, putative C.G. S.X.
0.03 5e-1 36 Oryza sativa Os03g0279700 AK111338.1 - ZPT2-12 5e-1 At2g37430 zinc finger (C2H2 type) family protein (ZAT11) C.G. S.X.
0.16 1e-3 44 Populus trichocarpa Ptp.7321.1.S1_at DN498339 hypothetical protein - 1e-1 At2g28710 zinc finger (C2H2 type) family protein C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.91680.1.A1_at BJ307156 - - 2e+0 At2g37430 zinc finger (C2H2 type) family protein (ZAT11) C.G. S.X.
0.05 1e+0 32 Vitis vinifera 1610689_at CB969755 hypothetical LOC100252368 - 8e-1 At1g63055 unknown protein C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.816.1.A1_at AI770437 - - 3e+0 At3g12977 DNA binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0010200 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
S GO:0045449 Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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