Gene omics information

Query gene ID At2g37190
Gene name 60S ribosomal protein L12 (RPL12A)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g3719081829560S ribosomal protein L12 (RPL12A)F:structural constituent of ribosome;P:response to cold, ribosome biogenesis;C:in 7 components;MBAOFPS.X.H.G.
0.7385.5At5g2785083284860S ribosomal protein L18 (RPL18C)F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane;MOFPAS.X.H.G.
0.7385.5At3g0256082130840S ribosomal protein S7 (RPS7B)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane;MPOFS.X.H.G.
0.7385.5At5g0709083060040S ribosomal protein S4 (RPS4B)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane;MOAFPS.X.H.G.
0.7284.8At1g2740083963060S ribosomal protein L17 (RPL17A)F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, plasma membrane, chloroplast, vacuole;MOBAFPS.X.H.G.
0.7284.8At3g6287082546260S ribosomal protein L7A (RPL7aB)F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane;MOFAPS.X.H.G.
0.7284.8At3g0711081989760S ribosomal protein L13A (RPL13aA)F:structural constituent of ribosome;P:translation;C:in 6 components;BOMAPFS.X.H.G.
0.7083.5At5g6117083623840S ribosomal protein S19 (RPS19C)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, vacuole;MOAPFBS.X.H.G.
0.7083.5At3g0484081964440S ribosomal protein S3A (RPS3aA)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast;MOAPFBS.X.H.G.
0.6982.9At1g3403084030040S ribosomal protein S18 (RPS18B)F:structural constituent of ribosome, RNA binding, nucleic acid binding;P:translation;C:in 6 components;BOPMAFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.399.3GSM252670Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activity
11.299.2GSM252663Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activity
9.999.1GSM252684Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activity
9.899.1GSM252674Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activity
9.799.1GSM252669Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
9.499.1GSM252673Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
9.099.1GSM252689Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activity
8.999.0GSM252687Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activity
8.999.0GSM252683Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep5GSE9996Organ regeneration in plants is independent of stem cell niche activity
8.699.0GSM134312Penfield_1-14_embryo-ABA_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.873e-139494At3g5343082451160S ribosomal protein L12 (RPL12B)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, membrane;MBAOFPC.G.S.X.
0.771e-89329At5g6067083618860S ribosomal protein L12 (RPL12C)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MABOFPC.G.S.X.
0.032e-136At5g64670836588ribosomal protein L15 family proteinF:structural constituent of ribosome;P:translation, ribosome biogenesis;C:ribosome, intracellular, large ribosomal subunit;BOMFPC.G.S.X.
0.032e-136At5g44170834440-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBC.G.S.X.
0.012e-136At3g48560824015CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1)Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.C.G.S.X.
0.021e+034At5g05860830471UGT76C2F:in 6 functions;P:metabolic process;C:unknown;PMBVOFC.G.S.X.
0.051e+034At4g182826241157unknown proteinF:unknown;P:unknown;C:endomembrane systemC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.318e-30131Glycine maxGma.11290.1.S1_x_atCD390917--1e-40At3g5343060S ribosomal protein L12 (RPL12B)C.G.S.X.
0.293e-24111Hordeum vulgareContig2302_atContig2302--1e-25At5g6067060S ribosomal protein L12 (RPL12C)C.G.S.X.
0.262e-963Oryza sativaOs04g0598200BX897823-60S ribosomal protein L122e-21At3g5343060S ribosomal protein L12 (RPL12B)C.G.S.X.
0.529e-39161Populus trichocarpaPtpAffx.249.609.S1_s_atCV255236hypothetical protein-9e-39At2g3719060S ribosomal protein L12 (RPL12A)C.G.S.X.
0.324e-961Triticum aestivumTaAffx.57801.2.S1_atCA618203--5e-21At5g6067060S ribosomal protein L12 (RPL12C)C.G.S.X.
0.396e-1889Vitis vinifera1608540_atCB973488--1e-32At3g5343060S ribosomal protein L12 (RPL12B)C.G.S.X.
0.292e-961Zea maysZm.5313.2.A1_atCA39841860S ribosomal protein L12-9e-9At2g3719060S ribosomal protein L12 (RPL12A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
CGO:0042254The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
03010Link to KEGG PATHWAYRibosome
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