Gene omics information

Query gene ID At2g36710
Gene name pectinesterase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g36710818243pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;MOPBFVAS.X.H.G.
0.3338.1At1g35820840484unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3338.1At3g08500819997MYB83 (myb domain protein 83)Encodes a putative R2R3-type MYB transcription factor (MYB83).S.X.H.G.
0.2217.5At1g401503767174transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.146.8At2g29610817511-pseudogene of the F-box protein family, contains Pfam profile PF00646: F-box domainS.X.H.G.
0.124.9At3g296503769022transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
440.1100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
403.5100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
342.9100.0E-MEXP-1451-raw-cel-1585200362
261.6100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
238.2100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
231.7100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
230.7100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
220.6100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
212.1100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
209.0100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At5g50140835079ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.016e-136At3g60730825244pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMC.G.S.X.
0.016e-136At2g45220819130pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFOMC.G.S.X.
0.016e-136At1g10330837572pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFC.G.S.X.
0.012e+034At5g55890835685unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e+034At5g55880835684unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+034At5g07430830634pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMC.G.S.X.
0.012e+034At5g10550830920GTE2 (Global transcription factor group E 2)This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-446Glycine maxGma.13597.1.A1_atCD401381--2e-37At5g47500pectinesterase family proteinC.G.S.X.
0.021e+034Hordeum vulgareHVSMEi0016B10r2_atHVSMEi0016B10r2--1e-1At2g25500-C.G.S.X.
0.021e+036Oryza sativaOs08g0395300AU223384-Clathrin adaptor complex, small chain familyprotein1e-35At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
0.069e-756Populus trichocarpaPtpAffx.219792.1.S1_atpmrna35889hypothetical protein-2e-3At2g36700pectinesterase family proteinC.G.S.X.
0.024e-240Triticum aestivumTa.7915.1.A1_atCD374091--1e+0At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)C.G.S.X.
0.022e-136Vitis vinifera1614507_atCF373139hypothetical protein LOC100250082-5e-1At5g12300C2 domain-containing proteinC.G.S.X.
0.014e+032Zea maysZm.5701.1.S1_atBG841157AP-4 complex subunit sigma-1-7e-37At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00400Link to KaPPA-View 4Homogalacturonan degradation
00422Link to KaPPA-View 4Carbohydrate esterases
00442Link to KaPPA-View 4Rhamnogalacturonan II degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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