CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g36440

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.80 89.8 At2g36440 818218 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.87 93.5 At1g08860 837408 BON3 (BONZAI 3) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death. S.X. H.G.
0.85 92.4 At3g23220 821900 DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. S.X. H.G.
0.84 91.9 At2g32140 817773 transmembrane receptor F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBO S.X. H.G.
0.83 91.4 At2g22760 816806 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMA S.X. H.G.
0.82 90.9 At5g24110 832476 WRKY30 member of WRKY Transcription Factor; Group III S.X. H.G.
0.82 90.9 At2g31690 817725 lipase class 3 family protein encodes a triacylglycerol lipase located in plastoglobuli and involved in the degradation of triacylglycerol. It also has impact on leaf senescence and maintaining the structural integrity of thylakoids. S.X. H.G.
0.78 88.6 At2g20350 816554 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. S.X. H.G.
0.76 87.4 At4g26200 828726 ACS7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. S.X. H.G.
0.76 87.4 At2g37430 818319 zinc finger (C2H2 type) family protein (ZAT11) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
1848.0 100.0 E-MEXP-807-raw-cel-1173273144
1698.0 100.0 E-MEXP-807-raw-cel-1173273252
237.2 100.0 E-MEXP-807-raw-cel-1173273060
223.8 100.0 E-MEXP-807-raw-cel-1173273170
206.7 100.0 E-MEXP-807-raw-cel-1173273116
77.0 99.9 E-MEXP-807-raw-cel-1173273223
68.0 99.9 E-MEXP-807-raw-cel-1173273088
65.9 99.8 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
64.3 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
59.1 99.8 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 1e-1 36 At2g30630 817613 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB C.G. S.X.
0.03 4e-1 34 At3g57670 824936 NTT (NO TRANSMITTING TRACT) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:pollen tube growth, regulation of transcription;C:intracellular, chloroplast;MPOFVBA C.G. S.X.
0.02 4e-1 34 At3g11070 820278 outer membrane OMP85 family protein F:molecular_function unknown;P:biological_process unknown;C:outer membrane;BOMFP C.G. S.X.
0.01 2e+0 32 At5g61480 836269 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA C.G. S.X.
0.04 2e+0 32 At4g35750 829728 Rho-GTPase-activating protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO C.G. S.X.
0.01 2e+0 32 At3g18350 821364 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 2e+0 32 At1g29320 839806 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MOFBPVA C.G. S.X.
0.02 2e+0 32 At1g05540 837056 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 6e-1 34 Glycine max GmaAffx.44949.3.A1_at BE020869 - - 8e-1 At2g36440 unknown protein C.G. S.X.
0.03 3e+0 30 Hordeum vulgare Contig5017_s_at Contig5017 - - 2e-48 At3g62220 serine/threonine protein kinase, putative C.G. S.X.
0.04 3e+0 32 Oryza sativa Os02g0766800 9630.m05209 - - 3e-1 At1g48770 unknown protein C.G. S.X.
0.05 9e-3 40 Populus trichocarpa PtpAffx.618.10.S1_at CV269527 - - 7e-24 At1g15820 LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6) C.G. S.X.
0.07 7e+0 30 Triticum aestivum TaAffx.112795.1.S1_at CA620871 - - 1e+0 At3g10990 F-box family protein C.G. S.X.
0.05 2e+0 30 Vitis vinifera 1611061_at CF210632 hypothetical protein LOC100255578 - 2e-1 At5g45670 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.04 3e+0 30 Zea mays Zm.9408.1.A1_at AY107374.1 - - 1e-3 At5g55910 D6PK (D6 PROTEIN KINASE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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