Gene omics information

Query gene ID At2g36270
Gene name ABI5 (ABA INSENSITIVE 5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g36270818199ABI5 (ABA INSENSITIVE 5)Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.S.X.H.G.
0.9396.4At1g23070838915unknown proteinF:unknown;P:biological_process unknown;C:unknown;MPFOS.X.H.G.
0.8994.6At5g18450831963AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
0.8793.5At4g02690828203glutamate bindingF:glutamate binding;P:unknown;C:unknown;BOMPFVS.X.H.G.
0.8693.1At1g12130837765flavin-containing monooxygenase family protein / FMO family proteinF:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOMFPAS.X.H.G.
0.8592.4At4g25580828663stress-responsive protein-relatedF:unknown;P:unknown;C:cellular_component unknown;PMOFBVS.X.H.G.
0.8391.4At1g17010838271oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFMS.X.H.G.
0.7989.1At3g22490821820late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PBMVAOS.X.H.G.
0.7888.6At4g26050828711leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPBOFAVS.X.H.G.
0.7888.6At5g51760835250AHG1 (ABA-hypersensitive germination 1)Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1154.1100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
701.8100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
244.6100.0GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
159.099.9GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
137.599.9E-MEXP-849-raw-cel-1181980982
78.199.9GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
67.099.8GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibition
67.099.8GSM133311RIKEN-LI1AGSE5701AtGenExpress: Basic hormone treatment of seeds
63.799.8GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
56.199.8GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.071e-552At1g49720841395ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1)Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses.C.G.S.X.
0.064e-550At3g19290821463ABF4 (ABRE BINDING FACTOR 4)bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediate ABA-dependent stress responses.C.G.S.X.
0.054e-550At1g03970839356GBF4encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.C.G.S.X.
0.057e-446At1g45249841095ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2)Leucine zipper transcription factor that binds to the abscisic acid (ABA)–responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.C.G.S.X.
0.023e-344At5g28550832952-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.053e-344At2g41070818706EEL (ENHANCED EM LEVEL)Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-346Glycine maxGmaAffx.42504.1.A1_atBU545299--3e-4At2g36270ABI5 (ABA INSENSITIVE 5)C.G.S.X.
0.049e-857Hordeum vulgareContig15335_s_atContig15335--1e-3At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)C.G.S.X.
0.063e-757Oryza sativaOs01g0859300AK070998.1-ABA response element binding factor2e-7At2g36270ABI5 (ABA INSENSITIVE 5)C.G.S.X.
0.255e-24113Populus trichocarpaPtpAffx.206228.1.S1_atpmrna12361hypothetical protein-3e-24At2g36270ABI5 (ABA INSENSITIVE 5)C.G.S.X.
0.057e-446Triticum aestivumTa.29834.2.S1_atCA608186--3e-1At1g03970GBF4C.G.S.X.
0.072e-136Vitis vinifera1619664_atAJ237992.1ripening-related bZIP protein-like-7e-14At4g34000ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)C.G.S.X.
0.035e-652Zea maysZm.7740.1.A1_atBM079714hypothetical protein LOC100193967-3e-2At1g45249ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0043193Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
XGO:0009739A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
XGO:0009845The physiological and developmental changes that occur in a seed commencing with water uptake (imbibition) and terminating with the elongation of the embryonic axis.
XGO:0010187Any process that stops, prevents or reduces the frequency, rate or extent of seed germination.
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
XGO:0048316The process whose specific outcome is the progression of the seed over time, from its formation to the mature structure. A seed is a propagating organ formed in the sexual reproductive cycle of gymnosperms and angiosperms, consisting of a protective coat enclosing an embryo and food reserves.
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
SGO:0010182The process by which a change in the level of a mono- or disaccharide such as glucose, fructose or sucrose triggers the expression of genes controlling metabolic and developmental processes.
SGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
SGO:0006950A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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