Gene omics information

Query gene ID At2g36190
Gene name AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g36190818191AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAS.X.H.G.
0.9296.0At3g28007822424nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBS.X.H.G.
0.8693.1At3g25810822173myrcene/ocimene synthase, putativeF:in 7 functions;P:monoterpene biosynthetic process;C:plastid;POS.X.H.G.
0.7788.0At2g39060818492nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOS.X.H.G.
0.7486.1At5g49130834972MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMS.X.H.G.
0.6781.6At1g69180843249CRC (CRABS CLAW)Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.S.X.H.G.
0.4457.2At5g40350834033MYB24 (myb domain protein 24)Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. S.X.H.G.
0.3541.6At2g45650819173AGL6 (AGAMOUS-LIKE 6)sequence suggests this encodes a MADS-box transcription factorS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
514.4100.0E-MEXP-1474-raw-cel-1593932513
400.8100.0E-MEXP-1474-raw-cel-1593932705
325.1100.0E-MEXP-1474-raw-cel-1593932673
315.3100.0E-MEXP-1474-raw-cel-1593932609
208.5100.0E-MEXP-1474-raw-cel-1593932577
202.2100.0E-MEXP-1474-raw-cel-1593932481
147.899.9GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
145.799.9E-MEXP-1474-raw-cel-1593932737
140.599.9GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
136.899.9GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.597e-60232At3g52600824426AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAC.G.S.X.
0.092e-861At1g55120841955ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5)Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.C.G.S.X.
0.044e-654At5g11920831065AtcwINV6 (6-&1-fructan exohydrolase)Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity.C.G.S.X.
0.056e-550At3g13790820591ATBFRUCT1Encodes a protein with invertase activity.C.G.S.X.
0.021e-346At3g13784820590AtcwINV5 (Arabidopsis thaliana cell wall invertase 5)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-138Glycine maxGma.16814.1.S1_atAJ563368.1beta-fructofuranosidase-1e-9At3g52600AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)C.G.S.X.
0.043e-240Hordeum vulgareContig9965_atContig9965--4e-2At2g36190AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)C.G.S.X.
0.031e-140Oryza sativaOs.2252.1.S1_at---0C.G.S.X.
0.095e-963Populus trichocarpaPtpAffx.163561.1.S1_atBU879414hypothetical protein-3e-23At3g52600AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)C.G.S.X.
0.036e-859Triticum aestivumTa.198.1.S1_atAF030420.1cell wall invertase-2e-2At3g13790ATBFRUCT1C.G.S.X.
0.031e-654Vitis vinifera1611027_atCB978747cell wall apoplastic invertase-1e-6At3g52600AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)C.G.S.X.
0.041e-1067Zea maysZm.14531.1.A1_atAY111968.1invertase cell wall3-1e-12At3g52600AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00022Link to KaPPA-View 4Biosynthesis and metabolism of sucrose
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00052Link to KEGG PATHWAYGalactose metabolism
00500Link to KEGG PATHWAYStarch and sucrose metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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